RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 FAM96AQ9H5X1 160 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 VCX3AQ9NNX9 186 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PRMT7Q9NVM4 692 aaPredicted RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 CHMP2BQ9UQN3 213 aa21.18■□□□□ 0.98
SNX3-201ENST00000230085 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
SNX3-201ENST00000230085 ACKR2O00590 384 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 RFPL1O75677 317 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 RNF8O76064 485 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 ARF4P18085 180 aaPredicted RBP21.17■□□□□ 0.98
SNX3-201ENST00000230085 CRHR1P34998 444 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 CPOXP36551 454 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 FAM187BQ17R55 369 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 RTN4RL1Q86UN2 441 aaPredicted RBP21.17■□□□□ 0.98
SNX3-201ENST00000230085 FAM84AQ96KN4 292 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 GDF15Q99988 308 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 CENPKQ9BS16 269 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 SPATA16Q9BXB7 569 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 C12orf65Q9H3J6 166 aaKnown RBP21.17■□□□□ 0.98
SNX3-201ENST00000230085 NDUFA13Q9P0J0 144 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 PAK5Q9P286 719 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 SOX13Q9UN79 622 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 COMMD3-BMI1R4GMX3 469 aa21.17■□□□□ 0.98
SNX3-201ENST00000230085 SDR42E2A6NKP2 422 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 EIF4E1BA6NMX2 242 aaKnown RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 H3BRJ5 948 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 FAM189A1O60320 539 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 UPP2O95045 317 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 FGBP02675 491 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 PABPC4LP0CB38 370 aaKnown RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 RBP3P10745 1247 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 KRT3P12035 628 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 CNTFP26441 200 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 RFC1P35251 1148 aaPredicted RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 SERPINB9P50453 376 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 CDC16Q13042 620 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 IKBKEQ14164 716 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 PCBP1Q15365 356 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNX3-201ENST00000230085 ALYREFQ86V81 257 aaKnown RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 CDR2LQ86X02 465 aaPredicted RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 DTX3LQ8TDB6 740 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 FAM172AQ8WUF8 416 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 KLF6Q99612 283 aaPredicted RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 METTL5Q9NRN9 209 aaKnown RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 CISHQ9NSE2 258 aa21.16■□□□□ 0.98
SNX3-201ENST00000230085 HBS1LQ9Y450 684 aaKnown RBP21.16■□□□□ 0.98
SNX3-201ENST00000230085 TRIM49D1C9J1S8 452 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 MAGEA3P43357 314 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 MRPS5P82675 430 aaKnown RBP21.15■□□□□ 0.98
SNX3-201ENST00000230085 TFDP2Q14188 446 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 LIN52Q52LA3 116 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 IZUMO2Q6UXV1 221 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 CRLF3Q8IUI8 442 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 DRAXINQ8NBI3 349 aaPredicted RBP21.15■□□□□ 0.98
SNX3-201ENST00000230085 ADAM2Q99965 735 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 POPDC2Q9HBU9 364 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 MED7O43513 233 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 PEX1O43933 1283 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 AP1G2O75843 785 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 KRT38O76015 456 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 BPGMP07738 259 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 GABRB2P47870 512 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 CDHR3Q6ZTQ4 885 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 PDSS2Q86YH6 399 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 LINC01599Q8WXQ3 324 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 TARS2Q9BW92 718 aaKnown RBP21.15■□□□□ 0.98
SNX3-201ENST00000230085 FTHL17Q9BXU8 183 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 THAP1Q9NVV9 213 aa21.15■□□□□ 0.98
SNX3-201ENST00000230085 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.15■□□□□ 0.98
SNX3-201ENST00000230085 ZNF487B1APH4 448 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 ENPP3O14638 875 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 CASQ2O14958 399 aaPredicted RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 BRD2P25440 801 aaKnown RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 YWHAZP63104 245 aaKnown RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 ROR1Q01973 937 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 DSC3Q14574 896 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 PTPN20Q4JDL3 420 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 C9orf50Q5SZB4 431 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 PGM2L1Q6PCE3 622 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 PSRC1Q6PGN9 363 aaPredicted RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 FAM71DQ8N9W8 422 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 ACMSDQ8TDX5 336 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 ADAM33Q9BZ11 813 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 UBE2OQ9C0C9 1292 aaKnown RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 MIS12Q9H081 205 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 S100A14Q9HCY8 104 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 ARMCX1Q9P291 453 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 PPARGC1AQ9UBK2 798 aaKnown RBP21.14■□□□□ 0.97
SNX3-201ENST00000230085 ITGA11Q9UKX5 1188 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 MICAL3Q7RTP6 2002 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 ANK1P16157 1881 aa21.14■□□□□ 0.97
SNX3-201ENST00000230085 A0A088AWK7 358 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 KLHL2O95198 593 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 GSTT1P30711 240 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 L1CAMP32004 1257 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 BASP1P80723 227 aaKnown RBP21.13■□□□□ 0.97
SNX3-201ENST00000230085 TMPRSS15P98073 1019 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 TMEM132AQ24JP5 1023 aa21.13■□□□□ 0.97
SNX3-201ENST00000230085 TWF2Q6IBS0 349 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms