RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 CBLBQ13191 982 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 FAM182AQ5T1J6 154 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 RASIP1Q5U651 963 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 TP53INP2Q8IXH6 220 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 ZBED8Q8IZ13 594 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 NETO2Q8NC67 525 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 EPS8L3Q8TE67 593 aaKnown RBP16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 P2RY11Q96G91 374 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 FCRL2Q96LA5 508 aaPredicted RBP16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 ROPN1BQ9BZX4 212 aaPredicted RBP16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 CENPHQ9H3R5 247 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 ROPN1Q9HAT0 212 aaPredicted RBP16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 SPG21Q9NZD8 308 aa16.08■□□□□ 0.17
LAPTM4A-201ENST00000175091 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 MYO18AQ92614 2054 aaKnown RBP16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 NUP205Q92621 2012 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 TUFMP49411 452 aaKnown RBP16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 PPIDQ08752 370 aaKnown RBP16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 GALNT2Q10471 571 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 FNBP1LQ5T0N5 605 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 FAXCQ5TGI0 409 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 TPGS2Q68CL5 300 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 PPP1R21Q6ZMI0 780 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 DDX53Q86TM3 631 aaKnown RBP16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 PDIK1LQ8N165 341 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 VPS52Q8N1B4 723 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZNF461Q8TAF7 563 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 GIPC2Q8TF65 315 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 TLCD1Q96CP7 247 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 HDAC11Q96DB2 347 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 YME1L1Q96TA2 773 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 NR2E3Q9Y5X4 410 aa16.08■□□□□ 0.16
LAPTM4A-201ENST00000175091 NYNRINQ9P2P1 1898 aaKnown RBP16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 OBSL1O75147 1896 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 RNF103O00237 685 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 OPHN1O60890 802 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 BANF1O75531 89 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TCEA3O75764 348 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 METTL18O95568 372 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 URODP06132 367 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 SLC2A3P11169 496 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TPSB2P20231 275 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 NR1D1P20393 614 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 PPM1AP35813 382 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TBX4P57082 545 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 AP1B1Q10567 949 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 SEMA5AQ13591 1074 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TPSAB1Q15661 275 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 EMC10Q5UCC4 262 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 KDM7AQ6ZMT4 941 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 TBC1D31Q96DN5 1066 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 FERMT1Q9BQL6 677 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 FRMD8Q9BZ67 464 aaPredicted RBP16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 BRD8Q9H0E9 1235 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 SIK2Q9H0K1 926 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ETNK1Q9HBU6 452 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 PSD3Q9NYI0 1048 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 HS3ST4Q9Y661 456 aa16.07■□□□□ 0.16
LAPTM4A-201ENST00000175091 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 RASGRF2O14827 1237 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 STK10O94804 968 aaKnown RBP16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 SEC24AO95486 1093 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 IGLV3-27P01718 113 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 MX2P20592 715 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 WASHC5Q12768 1159 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 LONRF1Q17RB8 773 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 TNFAIP8L3Q5GJ75 292 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 C6orf118Q5T5N4 469 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 PIK3R6Q5UE93 754 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 CCNYQ8ND76 341 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 SERPINB12Q96P63 405 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 ZMYND8Q9ULU4 1186 aaPredicted RBP16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 CLUHO75153 1309 aa16.06■□□□□ 0.16
LAPTM4A-201ENST00000175091 A0A087WUV0 522 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SMIM23A6NLE4 172 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 GJB5O95377 273 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 TBX18O95935 607 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 APOEP02649 317 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 APRTP07741 180 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SRGAP2BP0DMP2 458 aa16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 HTRA4P83105 476 aaPredicted RBP16.05■□□□□ 0.16
LAPTM4A-201ENST00000175091 SKOR1P84550 965 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms