RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	GBP1	P32455	592 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	TNFRSF4	P43489	277 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	CXCL12	P48061	93 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	DGKG	P49619	791 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	CXCR3	P49682	368 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	SULT1E1	P49888	294 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	NHLH1	Q02575	133 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	CSTF1	Q05048	431 aa	Known RBP	27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	PPP2R5D	Q14738	602 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	C2orf27A	Q580R0	203 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	PPP1R15B	Q5SWA1	713 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	NELL1	Q92832	810 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	BTN2A3P	Q96KV6	586 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	ZDHHC4	Q9NPG8	344 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	FAM86C1	Q9NVL1	165 aa		27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	27.69	■■■□□ 2.02	5e-11	■■■□□ 15.1
VEGFA-231	ENST00000640499	MYO18A	Q92614	2054 aa	Known RBP	27.69	■■■□□ 2.02
VEGFA-231	ENST00000640499	TBC1D3B	A6NDS4	549 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	PAPSS2	O95340	614 aa	Predicted RBP	27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	ADCY5	O95622	1261 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	APOE	P02649	317 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	CYBB	P04839	570 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	CALB1	P05937	261 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	TPM3	P06753	285 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	RRM1	P23921	792 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	CCR1	P32246	355 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	RFC1	P35251	1148 aa	Predicted RBP	27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	CCR3	P51677	355 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	CCDC14	Q49A88	953 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	MS4A13	Q5J8X5	152 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	ARTN	Q5T4W7	220 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	SH3PXD2A	Q5TCZ1	1133 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	RXFP2	Q8WXD0	754 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	PHOX2B	Q99453	314 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	SLC27A6	Q9Y2P4	619 aa		27.68	■■■□□ 2.02
VEGFA-231	ENST00000640499	ENDOD1	O94919	500 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	HNRNPH3	P31942	346 aa	Known RBP	27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	RPS24	P62847	133 aa	Known RBP	27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	DMWD	Q09019	674 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	GEN1	Q17RS7	908 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	RAP1GAP2	Q684P5	730 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	C3orf20	Q8ND61	904 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	WFDC5	Q8TCV5	224 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	LMLN	Q96KR4	655 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	TMPRSS4	Q9NRS4	437 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	ARHGEF38	Q9NXL2	777 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	STAP1	Q9ULZ2	295 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	STARD13	Q9Y3M8	1113 aa		27.67	■■■□□ 2.02
VEGFA-231	ENST00000640499	SIGLEC16	A6NMB1	481 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	TBL1X	O60907	577 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	SERPING1	P05155	500 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	KRT3	P12035	628 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	GZMA	P12544	262 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	TACR2	P21452	398 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	ARID5B	Q14865	1188 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	C15orf59	Q2T9L4	293 aa	Predicted RBP	27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	C10orf76	Q5T2E6	689 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	MPP7	Q5T2T1	576 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	WDR59	Q6PJI9	974 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	CFAP52	Q8N1V2	620 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	ATP6V0D2	Q8N8Y2	350 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	IL17RC	Q8NAC3	791 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	IRX2	Q9BZI1	471 aa	Predicted RBP	27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	ARHGAP20	Q9P2F6	1191 aa		27.66	■■■□□ 2.02
VEGFA-231	ENST00000640499	FTL	P02792	175 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	SLC2A3	P11169	496 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	HNRNPL	P14866	589 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	TIE1	P35590	1138 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	RPL7A	P62424	266 aa	Known RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	MRPS21	P82921	87 aa	Known RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	DEUP1	Q05D60	604 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	TBX2	Q13207	712 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	ZNF528	Q3MIS6	628 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	TMEM215	Q68D42	235 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	CCDC33	Q8N5R6	958 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	ALLC	Q8N6M5	410 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	CENPI	Q92674	756 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	ATOH1	Q92858	354 aa	Predicted RBP	27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	RNF34	Q969K3	372 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	VCPIP1	Q96JH7	1222 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	SLC2A11	Q9BYW1	496 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	HS3ST4	Q9Y661	456 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	FANCM	Q8IYD8	2048 aa		27.65	■■■□□ 2.02
VEGFA-231	ENST00000640499	VPS13A	Q96RL7	3174 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ADAM23	O75077	832 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ATG13	O75143	517 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	PAGE1	O75459	146 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	F9	P00740	461 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	PDGFRA	P16234	1089 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	HLA-F	P30511	346 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ATP11A	P98196	1134 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	SYT13	Q7L8C5	426 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	C14orf80	Q86SX3	495 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	LGI2	Q8N0V4	545 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ACOX2	Q99424	681 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	DNAJC7	Q99615	494 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	SELENOO	Q9BVL4	669 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	TKTL2	Q9H0I9	626 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ISCU	Q9H1K1	167 aa		27.64	■■■□□ 2.02

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