RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CPNE8Q86YQ8 564 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 SLC35G2Q8TBE7 412 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 FNIP1Q8TF40 1166 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
GTF3A-209ENST00000640289 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
GTF3A-209ENST00000640289 BBS2Q9BXC9 721 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 SIK2Q9H0K1 926 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
GTF3A-209ENST00000640289 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 INTUQ9ULD6 942 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 MYO10Q9HD67 2058 aa13.68□□□□□ -0.22
GTF3A-209ENST00000640289 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 HOXC11O43248 304 aaPredicted RBP13.67□□□□□ -0.22
GTF3A-209ENST00000640289 TYRP14679 529 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 TCF4P15884 667 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 ADRA1BP35368 520 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 OPRD1P41143 372 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 CCZ1BP86790 482 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 CCZ1P86791 482 aaPredicted RBP13.67□□□□□ -0.22
GTF3A-209ENST00000640289 PRKCQQ04759 706 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 PON2Q15165 354 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 C14orf80Q86SX3 495 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
GTF3A-209ENST00000640289 LGI2Q8N0V4 545 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 RFFLQ8WZ73 363 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 FAM3CQ92520 227 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 TMA16Q96EY4 203 aaKnown RBP13.67□□□□□ -0.22
GTF3A-209ENST00000640289 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 FBRSL1Q9HCM7 1045 aaKnown RBP13.67□□□□□ -0.22
GTF3A-209ENST00000640289 MARK1Q9P0L2 795 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 PCSK1NQ9UHG2 260 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 CLEC4EQ9ULY5 219 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 PAXBP1Q9Y5B6 917 aa13.67□□□□□ -0.22
GTF3A-209ENST00000640289 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 M0R296 226 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MYO1FO00160 1098 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 TRIM24O15164 1050 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 TBL1XO60907 577 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 LRCH4O75427 683 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 RNF8O76064 485 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 PENKP01210 267 aaPredicted RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 DESP17661 470 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MIPP30301 263 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 IRAK1P51617 712 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 STARD6P59095 220 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 RPS24P62847 133 aaKnown RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MESP2Q0VG99 397 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 AUHQ13825 339 aaKnown RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 ARL13BQ3SXY8 428 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MPPE1Q53F39 396 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 CIR1Q86X95 450 aaPredicted RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 CFAP52Q8N1V2 620 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 PYROXD2Q8N2H3 581 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 CCDC112Q8NEF3 446 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 IGSF8Q969P0 613 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 DDX50Q9BQ39 737 aaKnown RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 LACRTQ9GZZ8 138 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 GPATCH2LQ9NWQ4 482 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 STIM2Q9P246 746 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 IP6K2Q9UHH9 426 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 VANGL2Q9ULK5 521 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 NDRG2Q9UN36 371 aaKnown RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
GTF3A-209ENST00000640289 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
GTF3A-209ENST00000640289 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 FAM86C2PA6NEL3 165 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 F5H5T6 163 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 MTA2O94776 668 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 PROSCO94903 275 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 CYBBP04839 570 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 GLULP15104 373 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 HOXD9P28356 352 aaPredicted RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 GALK1P51570 392 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 VAV2P52735 878 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 KRT83P78385 493 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 KDSRQ06136 332 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 MESDQ14696 234 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 ZNF852Q6ZMS4 543 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 CYP4V2Q6ZWL3 525 aaPredicted RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 SLFN11Q7Z7L1 901 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms