RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FERMT1Q9BQL6 677 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 ANLNQ9NQW6 1124 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 DDIT4Q9NX09 232 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 GRID1Q9ULK0 1009 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 I6L893 689 aaPredicted RBP20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 DNM1LO00429 736 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 PPP1R12AO14974 1030 aaPredicted RBP20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 INPPL1O15357 1258 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 OPHN1O60890 802 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 GNRH1P01148 92 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 HCAR3P49019 387 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 SARNPP82979 210 aaKnown RBP20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 DENND5BQ6ZUT9 1274 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 CTU1Q7Z7A3 348 aaKnown RBP20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 RNF180Q86T96 592 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 SCML4Q8N228 414 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 BANPQ8N9N5 519 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 EBNA1BP2Q99848 306 aaKnown RBP20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 CAPN7Q9Y6W3 813 aa20.34■□□□□ 0.85
PCDHB11-202ENST00000624887 COL4A4P53420 1690 aaPredicted RBP20.33■□□□□ 0.85
PCDHB11-202ENST00000624887 FAM72CH0Y354 149 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 RNF103O00237 685 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 BDNFP23560 247 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 HTRA3P83110 453 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 AP1B1Q10567 949 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 ARL13BQ3SXY8 428 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 MAP3K21Q5TCX8 1036 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM72AQ5TYM5 149 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM72DQ6L9T8 149 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 CGB2Q6NT52 195 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 TRPM8Q7Z2W7 1104 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 SLC26A11Q86WA9 606 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM72BQ86X60 149 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 COLGALT1Q8NBJ5 622 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 RAET1EQ8TD07 263 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 HASPINQ8TF76 798 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 COLEC11Q9BWP8 271 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 PITPNM3Q9BZ71 974 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 PRDM12Q9H4Q4 367 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 DMAP1Q9NPF5 467 aaPredicted RBP20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 TMLHEQ9NVH6 421 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 RAD54BQ9Y620 910 aa20.33■□□□□ 0.84
PCDHB11-202ENST00000624887 TM9SF1O15321 606 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 APOEP02649 317 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 MT-ND3P03897 115 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 MLNP12872 115 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ERCC2P18074 760 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ACLYP53396 1101 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 FAAP100Q0VG06 881 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 HHATQ5VTY9 493 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 OVOS1Q6IE37 1185 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 DCLRE1AQ6PJP8 1040 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 LVRNQ6Q4G3 990 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 UNC5AQ6ZN44 842 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 LRRC6Q86X45 466 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 OR10T2Q8NGX3 314 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 SUSD3Q96L08 255 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 PLCD4Q9BRC7 762 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 EIF2B3Q9NR50 452 aaKnown RBP20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 PRKAG3Q9UGI9 489 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF180Q9UJW8 692 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ARL2BPQ9Y2Y0 163 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ARHGEF37A1IGU5 675 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF189O75820 626 aaPredicted RBP20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 AMHP03971 560 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 CXCR3P49682 368 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 PDZD4Q76G19 769 aaPredicted RBP20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 LRRTM3Q86VH5 581 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 NETO2Q8NC67 525 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 PXYLP1Q8TE99 480 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 EDEM1Q92611 657 aa20.32■□□□□ 0.84
PCDHB11-202ENST00000624887 PTPRDP23468 1912 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 ITGB1P05556 798 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 GRIA1P42261 906 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 ZNF135P52742 658 aaPredicted RBP20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 TPI1P60174 286 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 WASHC5Q12768 1159 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 TTC31Q49AM3 519 aaPredicted RBP20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 BSPRYQ5W0U4 402 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 THEM5Q8N1Q8 247 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 MPP5Q8N3R9 675 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 GSDMBQ8TAX9 411 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 TCP10LQ8TDR4 215 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 TMEM209Q96SK2 561 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 WDCPQ9H6R7 721 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 MAD1L1Q9Y6D9 718 aa20.31■□□□□ 0.84
PCDHB11-202ENST00000624887 CXorf49A8MYA2 514 aaPredicted RBP20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 GOLGA8RI6L899 631 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 TYMPP19971 482 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 SCTRP47872 440 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 SLC18A2Q05940 514 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 DNAJC3Q13217 504 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 PARP6Q2NL67 630 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 TTC39BQ5VTQ0 682 aaPredicted RBP20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 SH2D5Q6ZV89 423 aa20.3■□□□□ 0.84
PCDHB11-202ENST00000624887 CTAGE3PQ8IX95 158 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms