RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 VCLP18206 1134 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 ICAM3P32942 547 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 RPL22P35268 128 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 RAP1GAPP47736 663 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 GMPSP49915 693 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 HIRAP54198 1017 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 SLC18A1P54219 525 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 OSTNP61366 133 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 TAP1Q03518 808 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 DLG1Q12959 904 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ORC1Q13415 861 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 PTPN20Q4JDL3 420 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 FAM182AQ5T1J6 154 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 TWF2Q6IBS0 349 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 POTEHQ6S545 545 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ZPBP2Q6X784 338 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 RAPH1Q70E73 1250 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ITIH5Q86UX2 942 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 RASSF3Q86WH2 238 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 TMEM130Q8N3G9 435 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CPSF7Q8N684 471 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 NIPA2Q8N8Q9 360 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ACMSDQ8TDX5 336 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ZNF75CPQ92670 426 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 MRPL4Q9BYD3 311 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 SENP1Q9P0U3 644 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 NXF1Q9UBU9 619 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 SLC24A2Q9UI40 661 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CYTH4Q9UIA0 394 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 UTRNP46939 3433 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 H3BSA7 217 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 CCDC22O60826 627 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 DNAJC6O75061 913 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 CLASP2O75122 1294 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 TOM1L1O75674 476 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 FARP2O94887 1054 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 EIF2S1P05198 315 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 CD48P09326 243 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 KRT3P12035 628 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 ZNF12P17014 697 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 PCYT1AP49585 367 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 STAT5BP51692 787 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 PDE1CQ14123 709 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 ZNF699Q32M78 642 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 SFT2D3Q587I9 215 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 EFHC2Q5JST6 749 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 RGS9BPQ6ZS82 235 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 OTOAQ7RTW8 1153 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 RHPN2Q8IUC4 686 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 PPIL6Q8IXY8 311 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 EMC1Q8N766 993 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 HCAR2Q8TDS4 363 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 RSAD2Q8WXG1 361 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 KLF6Q99612 283 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 RRN3Q9NYV6 651 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 PCSK1NQ9UHG2 260 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 ZNF112Q9UJU3 913 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 SATB2Q9UPW6 733 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 SNCAIPQ9Y6H5 919 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 A8MXQ7 604 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 HNRNPCL1O60812 293 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 LRCH4O75427 683 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 USP1O94782 785 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 ABCB1P08183 1280 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 NRLP54845 237 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 ARL4CP56559 192 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 SLC25A11Q02978 314 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 MAPK6Q16659 721 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 UNC45BQ8IWX7 931 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 THNSL1Q8IYQ7 743 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 WDR83Q9BRX9 315 aaKnown RBP12.81□□□□□ -0.36
LITAF-221ENST00000622633 SAR1AQ9NR31 198 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 PCDHGC3Q9UN70 934 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 CEPT1Q9Y6K0 416 aa12.81□□□□□ -0.36
LITAF-221ENST00000622633 C15orf38-AP3S2A0A0A6YYH1 394 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 OGTO15294 1046 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
LITAF-221ENST00000622633 KDELR1P24390 212 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 ADRA1DP25100 572 aa12.8□□□□□ -0.36
LITAF-221ENST00000622633 ASPAP45381 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms