RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 MTA1Q13330 715 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 LLGL1Q15334 1064 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 PPP2R5EQ16537 467 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 WHAMMP3Q1A5X7 153 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 FAM72AQ5TYM5 149 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 PIK3R6Q5UE93 754 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 FAM72DQ6L9T8 149 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 Q7L0L9 218 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 FAM72BQ86X60 149 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 VSIG1Q86XK7 387 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 SLC13A5Q86YT5 568 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 CMTM8Q8IZV2 173 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ING5Q8WYH8 240 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 AZIN2Q96A70 460 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 FAF2Q96CS3 445 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 PABPC5Q96DU9 382 aaKnown RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 MSLNLQ96KJ4 702 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 C1orf74Q96LT6 269 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ZSWIM3Q96MP5 696 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 RNF157Q96PX1 679 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF670Q9BS34 389 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 HEMGNQ9BXL5 484 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 CALN1Q9BXU9 219 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 OSBPL8Q9BZF1 889 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 SIK2Q9H0K1 926 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 ADAM7Q9H2U9 754 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 SMPD4Q9NXE4 827 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 SMARCAL1Q9NZC9 954 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 CWC15Q9P013 229 aaKnown RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 RCOR3Q9P2K3 495 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 OR12D3Q9UGF7 316 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 XPO7Q9UIA9 1087 aaKnown RBP8.35□□□□□ -1.07
TARDBP-219ENST00000617757 CDH22Q9UJ99 828 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 SNX10Q9Y5X0 201 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 HS3ST4Q9Y661 456 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 NUP205Q92621 2012 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 TRIOBPQ9H2D6 2365 aa8.35□□□□□ -1.07
TARDBP-219ENST00000617757 TCRBV7S2A1N4TA0A589 114 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 H3BRJ5 948 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 PGRMC1O00264 195 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 LEFTY2O00292 366 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CREB3O43889 395 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ACSL4O60488 711 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 GREM1O60565 184 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 LRIG2O94898 1065 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 KLKB1P03952 638 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 IRF1P10914 325 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 AMPD1P23109 780 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 FSHRP23945 695 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 WEE1P30291 646 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CORO1AP31146 461 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 AVPR1AP37288 418 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 GGCXP38435 758 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ARL4AP40617 200 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 HCAR3P49019 387 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 HARS2P49590 506 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF135P52742 658 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 KLF1Q13351 362 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CBX2Q14781 532 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CLUL1Q15846 466 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 LONRF2Q1L5Z9 754 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 TFDP3Q5H9I0 405 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 MS4A13Q5J8X5 152 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 HABP4Q5JVS0 413 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ATAT1Q5SQI0 421 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ARTNQ5T4W7 220 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ACBD5Q5T8D3 534 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 MANEALQ5VSG8 457 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 NADSYN1Q6IA69 706 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CES5AQ6NT32 575 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF572Q7Z3I7 529 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 C14orf80Q86SX3 495 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ZNF683Q8IZ20 524 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 PQLC3Q8N755 202 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 PCDH19Q8TAB3 1148 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 MYLIPQ8WY64 445 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 USP13Q92995 863 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 RIPOR3Q96MK2 946 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 NAP1L3Q99457 506 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 CDX2Q99626 313 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 PRMT1Q99873 361 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 MAK16Q9BXY0 300 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 DCLK3Q9C098 648 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
TARDBP-219ENST00000617757 SLITRK6Q9H5Y7 841 aa8.34□□□□□ -1.07
TARDBP-219ENST00000617757 TDP1Q9NUW8 608 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms