RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 H6PDO95479 791 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 PLCL1Q15111 1095 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 PDCD4Q53EL6 469 aaKnown RBP16.05■□□□□ 0.16
SYNRG-223ENST00000616179 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
SYNRG-223ENST00000616179 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
SYNRG-223ENST00000616179 OFCC1Q8IZS5 231 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 NAT8LQ8N9F0 302 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 GRIN3AQ8TCU5 1115 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 C20orf27Q9GZN8 174 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 USP18Q9UMW8 372 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 CLRN2A0PK11 232 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 SDR42E2A6NKP2 422 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 CAPN14A8MX76 684 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 ERVK-10P10266 1014 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 GTF2A2P52657 109 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 OXCT1P55809 520 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 RELAQ04206 551 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 DGKDQ16760 1214 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 RELL1Q8IUW5 271 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 CENPSQ8N2Z9 138 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 JOSD2Q8TAC2 188 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 C12orf43Q96C57 262 aaKnown RBP16.05■□□□□ 0.16
SYNRG-223ENST00000616179 PIF1Q9H611 641 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
SYNRG-223ENST00000616179 SH3PXD2BA1X283 911 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CLIC3O95833 236 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 MAGP20916 626 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 IL10P22301 178 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 MIPP30301 263 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 ATICP31939 592 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 ZNF781Q8N8C0 355 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 TFB1MQ8WVM0 346 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 NKD2Q969F2 451 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 PNPLA3Q9NST1 481 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CCNL1Q9UK58 526 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CDC14AQ9UNH5 594 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 TMEM191CA6NGB0 347 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 AOC1P19801 751 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 IL23RQ5VWK5 629 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 UNC5AQ6ZN44 842 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CHST15Q7LFX5 561 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 SETD3Q86TU7 594 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 AFAP1L2Q8N4X5 818 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CORO1BQ9BR76 489 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 HTR3EA5X5Y0 456 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CRCPO75575 148 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 YAP1P46937 504 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 LSM3P62310 102 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 CDKL1Q00532 357 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 AGKQ53H12 422 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 PLEKHA8Q96JA3 519 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 DGCR6LQ9BY27 220 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 PPP1R1BQ9UD71 204 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 ECM29Q5VYK3 1845 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 RGSL1A5PLK6 1076 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 TNNC2P02585 160 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 MRPS15P82914 257 aaKnown RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 SLC9B1Q4ZJI4 515 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 MARVELD2Q8N4S9 558 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 BPIFB6Q8NFQ5 453 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 ZNF669Q96BR6 464 aaPredicted RBP16.04■□□□□ 0.16
SYNRG-223ENST00000616179 PPP1R14BQ96C90 147 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
SYNRG-223ENST00000616179 IQCA1LA6NCM1 817 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 AGRPO00253 132 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 CNOT3O75175 753 aaKnown RBP16.03■□□□□ 0.16
SYNRG-223ENST00000616179 GSTT2P0CG29 244 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 GSTT2BP0CG30 244 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 JAK1P23458 1154 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 GRIA3P42263 894 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 RAP1GAPP47736 663 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 ACTR2P61160 394 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 TBCELQ5QJ74 424 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 TMEM26Q6ZUK4 368 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 DDX1Q92499 740 aaKnown RBP16.03■□□□□ 0.16
SYNRG-223ENST00000616179 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.163e-9■■■■■ 64.2
SYNRG-223ENST00000616179 POLRMTO00411 1230 aaKnown RBP16.03■□□□□ 0.16
SYNRG-223ENST00000616179 ETV4P43268 484 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 TRPC1P48995 793 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 NAGLUP54802 743 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 YWHAZP63104 245 aaKnown RBP16.03■□□□□ 0.16
SYNRG-223ENST00000616179 SLC12A1Q13621 1099 aa16.03■□□□□ 0.16
SYNRG-223ENST00000616179 ZIK1Q3SY52 487 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms