RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 TMEM161AQ9NX61 479 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 TBX21Q9UL17 535 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 CSDE1O75534 798 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 CD53P19397 219 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 CD52P31358 61 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 HAAOP46952 286 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 GFPT1Q06210 699 aaPredicted RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 MTFR1Q15390 333 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 GSTA3Q16772 222 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 GALNT7Q86SF2 657 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 ZC3H18Q86VM9 953 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 TMEM86AQ8N2M4 240 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 HERVK_113Q902F9 699 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 C8orf4Q9NR00 106 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 STIM2Q9P246 746 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 SRCAPQ6ZRS2 3230 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 EFCAB14O75071 495 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 CYP11A1P05108 521 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 H2AFZP0C0S5 128 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 RPL34P49207 117 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 NAA20P61599 178 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 GPNMBQ14956 572 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 ARHGAP44Q17R89 818 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 ZNF423Q2M1K9 1284 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 HSP90AA5PQ58FG0 334 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 ARHGAP17Q68EM7 881 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 AGMOQ6ZNB7 445 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 H2AFVQ71UI9 128 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 SLC51BQ86UW2 128 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 ZBED8Q8IZ13 594 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 NUP93Q8N1F7 819 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 TSEN2Q8NCE0 465 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 SEPT8Q92599 483 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 RUBCNQ92622 972 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 KAT5Q92993 513 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 EFHD2Q96C19 240 aaPredicted RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 NMD3Q96D46 503 aaKnown RBP9.09□□□□□ -0.95
VPS11-206ENST00000614944 PPP1R16BQ96T49 567 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 CALN1Q9BXU9 219 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 RAB17Q9H0T7 212 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 TRIM10Q9UDY6 481 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 DNAJC16Q9Y2G8 782 aa9.09□□□□□ -0.95
VPS11-206ENST00000614944 SNTNA6NMZ2 147 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ENPP3O14638 875 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 KIAA0355O15063 1070 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 CYP26A1O43174 497 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ZW10O43264 779 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 LRRN2O75325 713 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 KRT75O95678 551 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 PABPC4LP0CB38 370 aaKnown RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 EVI2BP34910 448 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 TAF6P49848 677 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 C1QBPQ07021 282 aaKnown RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 CRYBG2Q8N1P7 616 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 EXD1Q8NHP7 514 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ATL1Q8WXF7 558 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 RFFLQ8WZ73 363 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 RAB3IPQ96QF0 476 aaPredicted RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 PI4K2AQ9BTU6 479 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 RSAD1Q9HA92 442 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 SCPEP1Q9HB40 452 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 PALMDQ9NP74 551 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ARHGEF3Q9NR81 526 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 UVRAGQ9P2Y5 699 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ADAMTS1Q9UHI8 967 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 GOLGA8MH3BSY2 632 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 IDH3BO43837 385 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 THP07101 528 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 DRD4P21917 467 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 HSPA9P38646 679 aaKnown RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 DSC1Q08554 894 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 C11orf63Q6NUN7 778 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 DSTYKQ6XUX3 929 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 NUP85Q9BW27 656 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 C11orf49Q9H6J7 331 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 NR2E3Q9Y5X4 410 aa9.08□□□□□ -0.96
VPS11-206ENST00000614944 FNDC1Q4ZHG4 1894 aaPredicted RBP9.08□□□□□ -0.96
VPS11-206ENST00000614944 TRIM64A6NGJ6 449 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TRIM64BA6NI03 449 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 LRRC72A6NJI9 287 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GABRDO14764 452 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 ABCB1P08183 1280 aaPredicted RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 RARAP10276 462 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 PABPC1P11940 636 aaKnown RBP9.07□□□□□ -0.96
VPS11-206ENST00000614944 SCNN1AP37088 669 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 GSSP48637 474 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 BLVRAP53004 296 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 TNNC1P63316 161 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 AMPD2Q01433 879 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 ITGA9Q13797 1035 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 CNGA2Q16280 664 aa9.07□□□□□ -0.96
VPS11-206ENST00000614944 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 282.3 ms