RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 SDC3O75056 442 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 BEST1O76090 585 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 HMBSP08397 361 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 C7P10643 843 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 NEK4P51957 841 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 MAP3K7CLP57077 242 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 ANAPC15P60006 121 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 ZSCAN23Q3MJ62 389 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 C3orf38Q5JPI3 329 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 CDCP2Q5VXM1 449 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 ARL6IP4Q66PJ3 421 aaKnown RBP10.78□□□□□ -0.68
SSX3-204ENST00000612497 KLHDC10Q6PID8 442 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 USP30Q70CQ3 517 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 KANSL1Q7Z3B3 1105 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 LARP4BQ92615 738 aaKnown RBP10.78□□□□□ -0.68
SSX3-204ENST00000612497 AK8Q96MA6 479 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 SMOQ99835 787 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
SSX3-204ENST00000612497 SLC2A11Q9BYW1 496 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 OSBPL2Q9H1P3 480 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 PABPC3Q9H361 631 aaKnown RBP10.78□□□□□ -0.68
SSX3-204ENST00000612497 NMUR1Q9HB89 426 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 SCML2Q9UQR0 700 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 PAXBP1Q9Y5B6 917 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 KIF26BQ2KJY2 2108 aa10.78□□□□□ -0.68
SSX3-204ENST00000612497 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.68
SSX3-204ENST00000612497 DOCK9Q9BZ29 2069 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 A0A1W2PQH9 124 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 CLSTN1O94985 981 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 TNNI1P19237 187 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 CORO1AP31146 461 aaKnown RBP10.77□□□□□ -0.69
SSX3-204ENST00000612497 HMGN5P82970 282 aaKnown RBP10.77□□□□□ -0.69
SSX3-204ENST00000612497 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
SSX3-204ENST00000612497 KCNJ12Q14500 433 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 ARL13BQ3SXY8 428 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 LINC00303Q3SY05 128 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 HS1BP3Q53T59 392 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 RILPL1Q5EBL4 403 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 MCTP1Q6DN14 999 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 CHST9Q7L1S5 443 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 TADA2BQ86TJ2 420 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 SPATS2Q86XZ4 545 aaKnown RBP10.77□□□□□ -0.69
SSX3-204ENST00000612497 CBWD2Q8IUF1 395 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 DENND1CQ8IV53 801 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 FUKQ8N0W3 1084 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 OR2T34Q8NGX1 318 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 JAKMIP2Q96AA8 810 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 TNIP3Q96KP6 325 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 DCLK3Q9C098 648 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 ABCG4Q9H172 646 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.77□□□□□ -0.69
SSX3-204ENST00000612497 SEL1LQ9UBV2 794 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 NAGPAQ9UK23 515 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 AGO1Q9UL18 857 aaKnown RBP10.77□□□□□ -0.69
SSX3-204ENST00000612497 SCML1Q9UN30 329 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.69
SSX3-204ENST00000612497 USP9YO00507 2555 aaPredicted RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 A0A1W2PP55 124 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 RNASEH2AO75792 299 aaKnown RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 DLATP10515 647 aaKnown RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 CCDC130P13994 396 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 GAP43P17677 238 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 CR2P20023 1033 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 CASP5P51878 434 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 COG7P83436 770 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 TLE1Q04724 770 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 SFSWAPQ12872 951 aaKnown RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 TRPC3Q13507 836 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 SERINC3Q13530 473 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 GPRIN1Q7Z2K8 1008 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 TMC6Q7Z403 805 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 ACOT1Q86TX2 421 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 SLC2A14Q8TDB8 520 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 WFIKKN2Q8TEU8 576 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 SLC46A1Q96NT5 459 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 OMDQ99983 421 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 RSPH9Q9H1X1 276 aaPredicted RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 SMYD3Q9H7B4 428 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
SSX3-204ENST00000612497 SERGEFQ9UGK8 458 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 SUN2Q9UH99 717 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 RASAL2Q9UJF2 1139 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
SSX3-204ENST00000612497 A0A1B0GVM2 712 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 ENO4A6NNW6 628 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 KIAA0391O15091 583 aaKnown RBP10.75□□□□□ -0.69
SSX3-204ENST00000612497 MID1O15344 667 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 FFAR2O15552 330 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 RNASEH1O60930 286 aaKnown RBP10.75□□□□□ -0.69
SSX3-204ENST00000612497 ATP5BP06576 529 aaKnown RBP10.75□□□□□ -0.69
SSX3-204ENST00000612497 RALAP11233 206 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 ITGB6P18564 788 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 HLA-FP30511 346 aa10.75□□□□□ -0.69
SSX3-204ENST00000612497 CCR5P51681 352 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms