RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CUL2Q13617 745 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ENPP2Q13822 863 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 HLA-BQ31612 363 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 EDRF1Q3B7T1 1238 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 BSPRYQ5W0U4 402 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 RFWD3Q6PCD5 774 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 BHLHA9Q7RTU4 235 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 WFIKKN2Q8TEU8 576 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ADAMTS14Q8WXS8 1223 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 TMA16Q96EY4 203 aaKnown RBP13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 TSG101Q99816 390 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 STIM2Q9P246 746 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 GGA2Q9UJY4 613 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 PCOLCE2Q9UKZ9 415 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 PLA2G4CQ9UP65 541 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 PLXNB3Q9ULL4 1909 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 NBEAQ8NFP9 2946 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 FAM47DPA6NHR8 397 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 TAF4O00268 1085 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 TBL1XO60907 577 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 DNTTP04053 509 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 ENPEPQ07075 957 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 TRIP4Q15650 581 aaPredicted RBP13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 TTC31Q49AM3 519 aaPredicted RBP13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 MBLAC2Q68D91 279 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 IL27RAQ6UWB1 636 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 SLCO6A1Q86UG4 719 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 PROSER1Q86XN7 944 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 MARCH9Q86YJ5 346 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 FAM217AQ8IXS0 508 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 WFDC5Q8TCV5 224 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 CCDC34Q96HJ3 373 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 MTG2Q9H4K7 406 aa13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 HBS1LQ9Y450 684 aaKnown RBP13.92□□□□□ -0.18
HMGB1P24-201ENST00000611897 GOLGA6L7A0A1B0GV03 622 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 M0QYV0 167 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 KCNK3O14649 394 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 TIMM44O43615 452 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 SEMA4FO95754 770 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ATXN1LP0C7T5 689 aaKnown RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 AFF3P51826 1226 aaKnown RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 IL9RQ01113 521 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 CAMK2GQ13555 558 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 TEAD4Q15561 434 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 KIF19Q2TAC6 998 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ADGRF1Q5T601 910 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 PM20D1Q6GTS8 502 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 LRSAM1Q6UWE0 723 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 AHI1Q8N157 1196 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 RBBP8NLQ8NC74 664 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 BTBD1Q9H0C5 482 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 BTBD3Q9Y2F9 522 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZDHHC9Q9Y397 364 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 NFE2L3Q9Y4A8 694 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 SNX11Q9Y5W9 270 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ADAMTS20P59510 1910 aa13.91□□□□□ -0.18
HMGB1P24-201ENST00000611897 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 FAM237AA0A1B0GTK4 181 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 O00370 1275 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 FLRT2O43155 660 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 CBFA2T3O75081 653 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 CALCAP01258 141 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 IGLV3-19P01714 112 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 ATP5BP06576 529 aaKnown RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 VDRP11473 427 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 POLR2EP19388 210 aaKnown RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 CD70P32970 193 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 PRCPP42785 496 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 NUMBP49757 651 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 DAOAP59103 153 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZNF445P59923 1031 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 CLEC4CQ8WTT0 213 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 BIRC7Q96CA5 298 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 FAXDC2Q96IV6 333 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 MIS12Q9H081 205 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 TM9SF3Q9HD45 589 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 PRSS16Q9NQE7 514 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 RMND1Q9NWS8 449 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 ARMCX3Q9UH62 379 aaPredicted RBP13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 PLXNA2O75051 1894 aa13.9□□□□□ -0.18
HMGB1P24-201ENST00000611897 A0A1W2PQ27 194 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms