RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 DNAJC16Q9Y2G8 782 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 PPP2R3BQ9Y5P8 575 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 FUOMA2VDF0 154 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TRPA1O75762 1119 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 LYPLA2O95372 231 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 H6PDO95479 791 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 C1QAP02745 245 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TCF4P15884 667 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
TP53-220ENST00000610623 BCL2A1Q16548 175 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 FRMD7Q6ZUT3 714 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 CTAGE3PQ8IX95 158 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ZNF280CQ8ND82 737 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ACTL9Q8TC94 416 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 DLG3Q92796 817 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 MFSD14AQ96MC6 490 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 RANBP9Q96S59 729 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 COQ6Q9Y2Z9 468 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
TP53-220ENST00000610623 RLFQ13129 1914 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 MYOCOSA0A1B0GUC4 107 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 C19orf81C9J6K1 198 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 VAMP1P23763 118 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 HMOX2P30519 316 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 SCNN1AP37088 669 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 BASP1P80723 227 aaKnown RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 TXNL4AP83876 142 aaKnown RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 MTMR1Q13613 665 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 PGM5Q15124 567 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 ZNF829Q3KNS6 432 aaPredicted RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 FSCBQ5H9T9 825 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 TMEM110Q86TL2 294 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 IL31RAQ8NI17 732 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 AGAP3Q96P47 875 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 FRMD8Q9BZ67 464 aaPredicted RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.44
TP53-220ENST00000610623 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.44
TP53-220ENST00000610623 SOBPA7XYQ1 873 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 VWA5AO00534 786 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 C8BP07358 591 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 COX4I1P13073 169 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 PRKCHP24723 683 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 GCGRP47871 477 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 SLC1A6P48664 564 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 IDH3AP50213 366 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 CCR3P51677 355 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 JAK3P52333 1124 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 RPS6P62753 249 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 MRPS9P82933 396 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 CDKL1Q00532 357 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 SPP2Q13103 211 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 DPYSL3Q14195 570 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 PSMD6Q15008 389 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 POLNQ7Z5Q5 900 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 CHERPQ8IWX8 916 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 NDUFAF2Q8N183 169 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 RDM1Q8NG50 284 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 DEPTORQ8TB45 409 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 PPP4R1Q8TF05 950 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 EIF2AQ9BY44 585 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 VPS28Q9UK41 221 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 FAM32AQ9Y421 112 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 TTLL3Q9Y4R7 772 aa12.27□□□□□ -0.45
TP53-220ENST00000610623 MYH9P35579 1960 aaKnown RBP12.27□□□□□ -0.45
TP53-220ENST00000610623 LOC285556D6RIA3 1793 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 TOM1L1O75674 476 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 KRT34O76011 436 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 COL6A2P12110 1019 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 SFNP31947 248 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 QARSP47897 775 aaKnown RBP12.26□□□□□ -0.45
TP53-220ENST00000610623 BCAP31P51572 246 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 MTM1Q13496 603 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 ACAP1Q15027 740 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 FASTKD1Q53R41 847 aaKnown RBP12.26□□□□□ -0.45
TP53-220ENST00000610623 TEDDM1Q5T9Z0 273 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 ZCCHC23Q6ZST2 131 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 BBS12Q6ZW61 710 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 DDHD1Q8NEL9 900 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 HM13Q8TCT9 377 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 KBTBD7Q8WVZ9 684 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 FBXL18Q96ME1 805 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 TAAR1Q96RJ0 339 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 WRNIP1Q96S55 665 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 LIN28AQ9H9Z2 209 aaKnown RBP12.26□□□□□ -0.45
TP53-220ENST00000610623 PXMP2Q9NR77 195 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 HOMER2Q9NSB8 354 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 CDH7Q9ULB5 785 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 AGTPBP1Q9UPW5 1226 aa12.26□□□□□ -0.45
TP53-220ENST00000610623 TMEM98Q9Y2Y6 226 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms