RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FAM72DQ6L9T8 149 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 RFWD3Q6PCD5 774 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 HTR3DQ70Z44 454 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SLFN11Q7Z7L1 901 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 NT5DC3Q86UY8 548 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 CHSY1Q86X52 802 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FAM72BQ86X60 149 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 MFSD6LQ8IWD5 586 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ADHFE1Q8IWW8 467 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 UNC45BQ8IWX7 931 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ZDHHC14Q8IZN3 488 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ATP6V0D2Q8N8Y2 350 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 HSPH1Q92598 858 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 KRT35Q92764 455 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 NTAN1Q96AB6 310 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 CALR3Q96L12 384 aaKnown RBP7.96□□□□□ -1.14
MSH6-211ENST00000606499 PRICKLE1Q96MT3 831 aaPredicted RBP7.96□□□□□ -1.14
MSH6-211ENST00000606499 DCLK3Q9C098 648 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SIK2Q9H0K1 926 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 LINC00597Q9H2U6 94 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.96□□□□□ -1.14
MSH6-211ENST00000606499 OBP2AQ9NY56 170 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 LIMD1Q9UGP4 676 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FZD10Q9ULW2 581 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 HS3ST4Q9Y661 456 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 TCF20Q9UGU0 1960 aaKnown RBP7.96□□□□□ -1.14
MSH6-211ENST00000606499 GOLGA6L9A6NEM1 432 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 PI4K2BG5E9Z4 385 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 LATS1O95835 1130 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 KRT1P04264 644 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 CD48P09326 243 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 BMP1P13497 986 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ARSAP15289 507 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 PSMC3P17980 439 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 TACR2P21452 398 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 GDI1P31150 447 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 SLC1A1P43005 524 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 IFNAR2P48551 515 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 DNA2P51530 1060 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 IRAK1P51617 712 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 TNK2Q07912 1038 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 HADHQ16836 314 aaKnown RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 ARL13BQ3SXY8 428 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 PPP6R3Q5H9R7 873 aaPredicted RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 ZNF569Q5MCW4 686 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ARTNQ5T4W7 220 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ADGRF1Q5T601 910 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ERMARDQ5T6L9 678 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 PEX26Q7Z412 305 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 POLNQ7Z5Q5 900 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 C14orf80Q86SX3 495 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 CIR1Q86X95 450 aaPredicted RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 RHOT1Q8IXI2 618 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 FAM217AQ8IXS0 508 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 YAF2Q8IY57 180 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 SYCE1Q8N0S2 351 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 CFAP52Q8N1V2 620 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 SLC35F6Q8N357 371 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 PLCD3Q8N3E9 789 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 TRIM58Q8NG06 486 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 TTC8Q8TAM2 541 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 DEPDC1BQ8WUY9 529 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 OSCP1Q8WVF1 389 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 TEKT4Q8WW24 435 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ATXN2LQ8WWM7 1075 aaKnown RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 CD101Q93033 1021 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 BHMTQ93088 406 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 E2F7Q96AV8 911 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 P2RY11Q96G91 374 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ASB2Q96Q27 587 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 ALS2CR12Q96Q35 445 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 PRMT1Q99873 361 aaKnown RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 NCAPGQ9BPX3 1015 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 EBF3Q9H4W6 596 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 DHX35Q9H5Z1 703 aaKnown RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 KCNK12Q9HB15 430 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 KCND1Q9NSA2 647 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 DUS2Q9NX74 493 aaKnown RBP7.95□□□□□ -1.14
MSH6-211ENST00000606499 PRKAG3Q9UGI9 489 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 SLC12A6Q9UHW9 1150 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 STOML2Q9UJZ1 356 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 VANGL2Q9ULK5 521 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 NEU3Q9UQ49 428 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
MSH6-211ENST00000606499 OTOL1A6NHN0 477 aaPredicted RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 E9PAM4 449 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 F5H5T6 163 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ARNTLO00327 626 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 GFRA2O00451 464 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 ENC1O14682 589 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 PSTPIP1O43586 416 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 NARSO43776 548 aaKnown RBP7.94□□□□□ -1.14
MSH6-211ENST00000606499 CREB3O43889 395 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 KIF5CO60282 957 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 SRGAP2O75044 1071 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 CYP17A1P05093 508 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 KRT7P08729 469 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 L1CAMP32004 1257 aa7.94□□□□□ -1.14
MSH6-211ENST00000606499 CTNNA1P35221 906 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms