RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 HHIPQ96QV1 700 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 NPY6RQ99463 290 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 ZDHHC4Q9NPG8 344 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
SSBP4-213ENST00000602088 TMEM59LQ9UK28 342 aa17.36■□□□□ 0.37
SSBP4-213ENST00000602088 SYNJ2BP-COX16A0A087WUM0 186 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 LRRC53A6NM62 1247 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 KCNU1A8MYU2 1149 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 M0QYT0 321 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 ADAM23O75077 832 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 LMNAP02545 664 aaKnown RBP17.35■□□□□ 0.37
SSBP4-213ENST00000602088 CCR1P32246 355 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 PTP4A2Q12974 167 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 NME3Q13232 169 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 GEN1Q17RS7 908 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 MS4A13Q5J8X5 152 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 EOGTQ5NDL2 527 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 OTUD1Q5VV17 481 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-213ENST00000602088 TMEM92Q6UXU6 159 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 ARCQ7LC44 396 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 TRMT11Q7Z4G4 463 aaKnown RBP17.35■□□□□ 0.37
SSBP4-213ENST00000602088 ATP6V0D2Q8N8Y2 350 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 RNF34Q969K3 372 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 SYT11Q9BT88 431 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 ADAM33Q9BZ11 813 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 NUCKS1Q9H1E3 243 aaKnown RBP17.35■□□□□ 0.37
SSBP4-213ENST00000602088 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 AIPL1Q9NZN9 384 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 COX16Q9P0S2 106 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 CALCOCO1Q9P1Z2 691 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 STAP1Q9ULZ2 295 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 ZNF292O60281 2723 aa17.35■□□□□ 0.37
SSBP4-213ENST00000602088 HRO43593 1189 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 GFRA3O60609 400 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 TBL1XO60907 577 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 APBB3O95704 486 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 HNRNPLP14866 589 aaKnown RBP eCLIP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 TFE3P19532 575 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 ABCB4P21439 1286 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 NTSR1P30989 418 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 CNR2P34972 360 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 FLT3P36888 993 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 NSFP46459 744 aaKnown RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 DGKEP52429 567 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 SLC25A52Q3SY17 297 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 EGFLAMQ63HQ2 1017 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 TRNP1Q6NT89 227 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 ANKS1BQ7Z6G8 1248 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 PHF13Q86YI8 300 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 HJURPQ8NCD3 748 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 MYEOVQ96EZ4 313 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 PGAP3Q96FM1 320 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 PRICKLE1Q96MT3 831 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-213ENST00000602088 C11orf70Q9BRQ4 267 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 EPC1Q9H2F5 836 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 ADAM22Q9P0K1 906 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 IFNKQ9P0W0 207 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 EBF1Q9UH73 591 aa17.34■□□□□ 0.37
SSBP4-213ENST00000602088 TACR2P21452 398 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 HLA-FP30511 346 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 CXCR3P49682 368 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 SULT1E1P49888 294 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 RPS24P62847 133 aaKnown RBP17.33■□□□□ 0.36
SSBP4-213ENST00000602088 SFMBT2Q5VUG0 894 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 RAP1GAP2Q684P5 730 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 TMEM215Q68D42 235 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 KIAA0907Q7Z7F0 614 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-213ENST00000602088 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 OLIG1Q8TAK6 271 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 ACOX2Q99424 681 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 TBCBQ99426 244 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.36
SSBP4-213ENST00000602088 NUP58Q9BVL2 599 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 METTL5Q9NRN9 209 aaKnown RBP17.33■□□□□ 0.36
SSBP4-213ENST00000602088 PIGVQ9NUD9 493 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 SEPT11Q9NVA2 429 aaKnown RBP17.33■□□□□ 0.36
SSBP4-213ENST00000602088 TMEM51Q9NW97 253 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 ELOVL2Q9NXB9 296 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 STIM2Q9P246 746 aa17.33■□□□□ 0.36
SSBP4-213ENST00000602088 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 AXIN1O15169 862 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 F9P00740 461 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 CALB1P05937 261 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 TNFAIP3P21580 790 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 PRKCIP41743 596 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 WASP42768 502 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-213ENST00000602088 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
SSBP4-213ENST00000602088 MTA1Q13330 715 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 EIF4HQ15056 248 aaKnown RBP17.32■□□□□ 0.36
SSBP4-213ENST00000602088 ASIC2Q16515 512 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 E4F1Q66K89 784 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-213ENST00000602088 SDE2Q6IQ49 451 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 MON1BQ7L1V2 547 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 BNIPLQ7Z465 357 aa17.32■□□□□ 0.36
SSBP4-213ENST00000602088 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms