RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LSM7Q9UK45 103 aaKnown RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 SPECC1L-ADORA2AF8WAN1 911 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 M0QYT0 321 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 STK25O00506 426 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 IRAK2O43187 625 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 PI15O43692 258 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 PALMO75781 387 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 GPD1P21695 349 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 CTHP32929 405 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 SLC6A11P48066 632 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 ATXN1P54253 815 aaKnown RBP15.56■□□□□ 0.08
TRIM28-207ENST00000597136 NME3Q13232 169 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 CCDC14Q49A88 953 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 SH3PXD2AQ5TCZ1 1133 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 C11orf63Q6NUN7 778 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 TPGS1Q6ZTW0 290 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 NYAP1Q6ZVC0 841 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 DAAM2Q86T65 1068 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 KIAA1958Q8N8K9 716 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 FLCNQ8NFG4 579 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 NT5C3BQ969T7 300 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 TBCBQ99426 244 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 CNPY3Q9BT09 278 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 DCLK3Q9C098 648 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 TBC1D17Q9HA65 648 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 DDIT4Q9NX09 232 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 XPO7Q9UIA9 1087 aaKnown RBP15.56■□□□□ 0.08
TRIM28-207ENST00000597136 TLR6Q9Y2C9 796 aa15.56■□□□□ 0.08
TRIM28-207ENST00000597136 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 GPR37L1O60883 481 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PROSCO94903 275 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PSMA2P25787 234 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 SDC4P31431 198 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PTPN9P43378 593 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PRKCQQ04759 706 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 RING1Q06587 406 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 MESP2Q0VG99 397 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PIGHQ14442 188 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-207ENST00000597136 C15orf59Q2T9L4 293 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF569Q5MCW4 686 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 SLFN11Q7Z7L1 901 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 CPA6Q8N4T0 437 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 NIPA2Q8N8Q9 360 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 BHMTQ93088 406 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 SERPINB11Q96P15 392 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 ALS2CR12Q96Q35 445 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 FAM204AQ9H8W3 233 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 ANLNQ9NQW6 1124 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 SPHK2Q9NRA0 654 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 PIGVQ9NUD9 493 aa15.55■□□□□ 0.08
TRIM28-207ENST00000597136 ANTXRLA6NF34 631 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 TMEM110-MUSTN1A8MSY1 372 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 NFATC1O95644 943 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 MOCS2O96007 188 aaPredicted RBP15.54■□□□□ 0.08
TRIM28-207ENST00000597136 HARS2P49590 506 aaKnown RBP15.54■□□□□ 0.08
TRIM28-207ENST00000597136 SULT1E1P49888 294 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 GALK1P51570 392 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 ATP11AP98196 1134 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 FZD5Q13467 585 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 PON2Q15165 354 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 SLC25A52Q3SY17 297 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 CWF19L1Q69YN2 538 aaKnown RBP15.54■□□□□ 0.08
TRIM28-207ENST00000597136 NADSYN1Q6IA69 706 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 C12orf40Q86WS4 652 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 SYCE1Q8N0S2 351 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 NAT16Q8N8M0 369 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 FAM3CQ92520 227 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 OTUB2Q96DC9 234 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 MYEOVQ96EZ4 313 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 MFSD1Q9H3U5 465 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 TMPRSS4Q9NRS4 437 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 PLK2Q9NYY3 685 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 NDRG2Q9UN36 371 aaKnown RBP15.54■□□□□ 0.08
TRIM28-207ENST00000597136 ALG6Q9Y672 507 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 EML5Q05BV3 1969 aa15.54■□□□□ 0.08
TRIM28-207ENST00000597136 KANSL1LA0AUZ9 987 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 I6L893 689 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 TRIM24O15164 1050 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF500O60304 480 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 TSPAN3O60637 253 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 GLULP15104 373 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SLC6A4P31645 630 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 MAN1A1P33908 653 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 OPRD1P41143 372 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 MLLT6P55198 1093 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 GNG11P61952 73 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 NR1H3Q13133 447 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 UBXN2BQ14CS0 331 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ACAP1Q15027 740 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ANO4Q32M45 955 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 RFWD3Q6PCD5 774 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 BNIPLQ7Z465 357 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 BMP8AQ7Z5Y6 402 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 RALGPS2Q86X27 583 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 CPNE8Q86YQ8 564 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF687Q8N1G0 1237 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SLC35F6Q8N357 371 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms