RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 AP1G2O75843 785 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 STAG3L1P0CL83 205 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 PGAM1P18669 254 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 MX2P20592 715 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 NDST1P52848 882 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 OSTNP61366 133 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 CA9Q16790 459 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 SFT2D3Q587I9 215 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 HEATR6Q6AI08 1181 aaKnown RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 RNF111Q6ZNA4 994 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 TMEM126BQ8IUX1 230 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 CENPIQ92674 756 aaPredicted RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
VRK3-209ENST00000594948 PIWIL1Q96J94 861 aaKnown RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
VRK3-209ENST00000594948 A0A0A0MRY4 1105 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 GPR25O00155 361 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 TPP1O14773 563 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 B4GALT5O43286 388 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 H2AFYO75367 372 aaKnown RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 PRKCGP05129 697 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 ITGAXP20702 1163 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 MAGEA12P43365 314 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 MTTPP55157 894 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 HDAC4P56524 1084 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 RBP5P82980 135 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 ITGA9Q13797 1035 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 TMEM192Q8IY95 271 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 GDPD5Q8WTR4 605 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SPATA13Q96N96 652 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 GPR20Q99678 358 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 C11orf84Q9BUA3 381 aaPredicted RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 RCOR3Q9P2K3 495 aaPredicted RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 COPG2Q9UBF2 871 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 ADAMTS6Q9UKP5 1117 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 ARHGAP26Q9UNA1 814 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 POMPQ9Y244 141 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 CDY2AQ9Y6F7 541 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SOWAHBA6NEL2 793 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 A6NJR5 290 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 TMEM114B3SHH9 223 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 ATP9BO43861 1147 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 DGKIO75912 1065 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 ITGA2BP08514 1039 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 RALBP11234 206 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 VCLP18206 1134 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 NUMBP49757 651 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 HK2P52789 917 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 GBE1Q04446 702 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SLC10A2Q12908 348 aaPredicted RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 LSAMPQ13449 338 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 FRG1Q14331 258 aaKnown RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 ANKRD20A4Q4UJ75 823 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 RALGPS1Q5JS13 557 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 GRTP1Q5TC63 336 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 OGFRL1Q5TC84 451 aaPredicted RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 RIOX2Q8IUF8 465 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 SLC26A7Q8TE54 656 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 C6orf203Q9P0P8 240 aaPredicted RBP13.62□□□□□ -0.23
VRK3-209ENST00000594948 BTBD7Q9P203 1132 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 HESX1Q9UBX0 185 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 HACL1Q9UJ83 578 aa13.62□□□□□ -0.23
VRK3-209ENST00000594948 WDR27A2RRH5 827 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 SLC22A2O15244 555 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 CAPN15O75808 1086 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 CYP2C8P10632 490 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 GP5P40197 560 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 TMEM132DQ14C87 1099 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 CFAP157Q5JU67 520 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 SPANXN3Q5MJ09 141 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 EPGNQ6UW88 154 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 TFB1MQ8WVM0 346 aaKnown RBP13.61□□□□□ -0.23
VRK3-209ENST00000594948 HTR3CQ8WXA8 447 aa13.61□□□□□ -0.23
VRK3-209ENST00000594948 TRIM56Q9BRZ2 755 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms