RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 DAPK3O43293 454 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 MSI1O43347 362 aaKnown RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 ZNF189O75820 626 aaPredicted RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 APOC2P02655 101 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 TUBBP07437 444 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 COL9A1P20849 921 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 MCM3P25205 808 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 GABRR2P28476 465 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 L1CAMP32004 1257 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 NRIP1P48552 1158 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 ARSEP51690 589 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 TPI1P60174 286 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 COG7P83436 770 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 LMNB2Q03252 620 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 KLF1Q13351 362 aaPredicted RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 DHX34Q14147 1143 aaKnown RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 TAZQ16635 292 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 CYP1B1Q16678 543 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 ARHGAP15Q53QZ3 475 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 RAB6CQ53S08 254 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 ZC3H12AQ5D1E8 599 aaKnown RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 BZW1Q7L1Q6 419 aaKnown RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 MAATS1Q7Z4T9 603 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 MIB1Q86YT6 1006 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 HLA-CQ95604 372 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 BTN2A3PQ96KV6 586 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 KCTD15Q96SI1 283 aaPredicted RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 RAB6CQ9H0N0 254 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 STIM2Q9P246 746 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 FEZ2Q9UHY8 353 aaPredicted RBP15.17■□□□□ 0.02
CAPN12-202ENST00000593700 NUDT5Q9UKK9 219 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
CAPN12-202ENST00000593700 SHROOM3Q8TF72 1996 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 MCF2LO15068 1137 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 CCL16O15467 120 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 CTIFO43310 598 aaKnown RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 CREB3O43889 395 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 CST8O60676 142 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 KRT10P13645 584 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 HOXB8P17481 243 aaPredicted RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 PTPN2P17706 415 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 SERPINB6P35237 376 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 HYAL1Q12794 435 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 EIF4EBP2Q13542 120 aaPredicted RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 ANKRD20A8PQ5CZ79 823 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 TMEM184AQ6ZMB5 413 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 PDZD4Q76G19 769 aaPredicted RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 SLC22A17Q8WUG5 538 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 MAGOHBQ96A72 148 aaKnown RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 KRT12Q99456 494 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 DDX47Q9H0S4 455 aaKnown RBP15.16■□□□□ 0.02
CAPN12-202ENST00000593700 OSBPL2Q9H1P3 480 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 CCSER2Q9H7U1 834 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 SFXN1Q9H9B4 322 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 TRPC7Q9HCX4 862 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 THEGQ9P2T0 379 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 FAM50BQ9Y247 325 aa15.16■□□□□ 0.02
CAPN12-202ENST00000593700 FGF10O15520 208 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 GAS8O95995 478 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 MOCS2O96007 188 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 OAS1P00973 400 aaKnown RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 F11P03951 625 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CD48P09326 243 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 MBL2P11226 248 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 MYL4P12829 197 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 EPCAMP16422 314 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 HCAR3P49019 387 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 HARS2P49590 506 aaKnown RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 DYNLT1P63172 113 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 ADAM15Q13444 863 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CCDC85BQ15834 202 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CCNG2Q16589 344 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CA9Q16790 459 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CTC1Q2NKJ3 1217 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CCDC137Q6PK04 289 aaKnown RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 TSC1Q92574 1164 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 P3H4Q92791 437 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 SLC39A13Q96H72 371 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 FCRL2Q96LA5 508 aaPredicted RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CSPG4P5Q96PW8 444 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 DDX50Q9BQ39 737 aaKnown RBP15.15■□□□□ 0.02
CAPN12-202ENST00000593700 FERMT1Q9BQL6 677 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 DCLK3Q9C098 648 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 RAB17Q9H0T7 212 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 LRRC19Q9H756 370 aa15.15■□□□□ 0.02
CAPN12-202ENST00000593700 CATSPERBQ9H7T0 1116 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms