RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 RFC1P35251 1148 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-206ENST00000592942 CXCL12P48061 93 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 PTPN5P54829 565 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 KDSRQ06136 332 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 NME3Q13232 169 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 PPP2R5DQ14738 602 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 MS4A13Q5J8X5 152 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 PPP1R15BQ5SWA1 713 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 SPECC1LQ69YQ0 1117 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 TERB1Q8NA31 727 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 C3orf20Q8ND61 904 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 DDI1Q8WTU0 396 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 RXFP2Q8WXD0 754 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 BTN2A3PQ96KV6 586 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 CFAP57Q96MR6 1250 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 PRICKLE1Q96MT3 831 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-206ENST00000592942 IRX2Q9BZI1 471 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-206ENST00000592942 FAM204AQ9H8W3 233 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 FBXO4Q9UKT5 387 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 SLC27A6Q9Y2P4 619 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 STARD13Q9Y3M8 1113 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIM47-206ENST00000592942 MYO18AQ92614 2054 aaKnown RBP15.89■□□□□ 0.13
TRIM47-206ENST00000592942 DMDP11532 3685 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 KIAA1549LQ6ZVL6 1849 aa15.89■□□□□ 0.13
TRIM47-206ENST00000592942 MYO15AQ9UKN7 3530 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 SYNJ2BP-COX16A0A087WUM0 186 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 TBC1D3BA6NDS4 549 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 TMCO5BA8MYB1 307 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 ADCY5O95622 1261 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-206ENST00000592942 CALB1P05937 261 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 TPM3P06753 285 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 CCR1P32246 355 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 DGKGP49619 791 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 SULT1E1P49888 294 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 MPP7Q5T2T1 576 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 GRAMD4Q6IC98 578 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 KIAA0907Q7Z7F0 614 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-206ENST00000592942 RPLP0P6Q8NHW5 317 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 VCPIP1Q96JH7 1222 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 LMLNQ96KR4 655 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 ARHGEF38Q9NXL2 777 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 COX16Q9P0S2 106 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 ARHGAP20Q9P2F6 1191 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 STAP1Q9ULZ2 295 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 BZW2Q9Y6E2 419 aaKnown RBP15.88■□□□□ 0.13
TRIM47-206ENST00000592942 CACNA1HO95180 2353 aa15.88■□□□□ 0.13
TRIM47-206ENST00000592942 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 CYBBP04839 570 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 SERPING1P05155 500 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 SLC2A3P11169 496 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 KRT3P12035 628 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 TACR2P21452 398 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 RRM1P23921 792 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 CCR3P51677 355 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 SEC13P55735 322 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 RPL7AP62424 266 aaKnown RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 RPS24P62847 133 aaKnown RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 MRPS21P82921 87 aaKnown RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 CSTF1Q05048 431 aaKnown RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 DMWDQ09019 674 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 TBX2Q13207 712 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 GEN1Q17RS7 908 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 C15orf59Q2T9L4 293 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 ZNF528Q3MIS6 628 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 C2orf27AQ580R0 203 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 RAP1GAP2Q684P5 730 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 TMEM215Q68D42 235 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 C14orf80Q86SX3 495 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 ATP6V0D2Q8N8Y2 350 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 IL17RCQ8NAC3 791 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 WFDC5Q8TCV5 224 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 CENPIQ92674 756 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-206ENST00000592942 PHOX2BQ99453 314 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 SLC2A11Q9BYW1 496 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 ISCUQ9H1K1 167 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 ZDHHC4Q9NPG8 344 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 TMPRSS4Q9NRS4 437 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 ADAMTS1Q9UHI8 967 aa15.87■□□□□ 0.13
TRIM47-206ENST00000592942 TBL1XO60907 577 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 ADAM23O75077 832 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 ATG13O75143 517 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 RTN2O75298 545 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 PAGE1O75459 146 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 F9P00740 461 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 APOEP02649 317 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 HNRNPLP14866 589 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRIM47-206ENST00000592942 PDGFRAP16234 1089 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 HLA-FP30511 346 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 TIE1P35590 1138 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 PTPN9P43378 593 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 DEUP1Q05D60 604 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 PREPLQ4J6C6 727 aaPredicted RBP15.86■□□□□ 0.13
TRIM47-206ENST00000592942 PLEKHA7Q6IQ23 1121 aa15.86■□□□□ 0.13
TRIM47-206ENST00000592942 SYT13Q7L8C5 426 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms