RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CHST9Q7L1S5 443 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 LPCAT2Q7L5N7 544 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 FAM71AQ8IYT1 594 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 ENOX1Q8TC92 643 aaKnown RBP14.42□□□□□ -0.1
APOC1-208ENST00000592535 WFDC5Q8TCV5 224 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 MYEOVQ96EZ4 313 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 PPP1R13BQ96KQ4 1090 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 MRGPRX1Q96LB2 322 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 PRICKLE1Q96MT3 831 aaPredicted RBP14.42□□□□□ -0.1
APOC1-208ENST00000592535 TRIM62Q9BVG3 475 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 LSM14BQ9BX40 385 aaKnown RBP14.42□□□□□ -0.1
APOC1-208ENST00000592535 LHX5Q9H2C1 402 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 POPDC2Q9HBU9 364 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 PLCB1Q9NQ66 1216 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 XPO7Q9UIA9 1087 aaKnown RBP14.42□□□□□ -0.1
APOC1-208ENST00000592535 PI4KAP42356 2102 aa14.42□□□□□ -0.1
APOC1-208ENST00000592535 GON4LQ3T8J9 2241 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 CACNA1AO00555 2505 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 IGHV1OR15-9A0A0B4J2B8 117 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 NPC1O15118 1278 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 IRAK2O43187 625 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 TRUB2O95900 331 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 MOCS2O96007 188 aaPredicted RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 IGLV3-25P01717 112 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 ERBB2P04626 1255 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 PABPC1P11940 636 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 PRKCHP24723 683 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 KRT9P35527 623 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 PTGER3P43115 390 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 STARD3Q14849 445 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 PTPN20Q4JDL3 420 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 MPP7Q5T2T1 576 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 CDKAL1Q5VV42 579 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 RNF43Q68DV7 783 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 KIAA1324Q6UXG2 1013 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 C11orf57Q6ZUT1 292 aaPredicted RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 FAM183BPQ6ZVS7 135 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 KIAA0907Q7Z7F0 614 aaPredicted RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 ADIPOR2Q86V24 386 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 DEFB106AQ8N104 65 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 DEFB119Q8N690 84 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.41□□□□□ -0.1
APOC1-208ENST00000592535 HJURPQ8NCD3 748 aaPredicted RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 WFIKKN2Q8TEU8 576 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 CYB5D2Q8WUJ1 264 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 PIGKQ92643 395 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 DDX50Q9BQ39 737 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 NAA15Q9BXJ9 866 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 IRX2Q9BZI1 471 aaPredicted RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 NUCKS1Q9H1E3 243 aaKnown RBP14.41□□□□□ -0.1
APOC1-208ENST00000592535 STIM2Q9P246 746 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 GGA2Q9UJY4 613 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 CYP8B1Q9UNU6 501 aa14.41□□□□□ -0.1
APOC1-208ENST00000592535 PATE3B3GLJ2 98 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 TIMM44O43615 452 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 ZNF217O75362 1048 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 GRAP2O75791 330 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 APOEP02649 317 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 UCHL3P15374 230 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 CD70P32970 193 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 LIMK1P53667 647 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 RPS24P62847 133 aaKnown RBP14.4□□□□□ -0.1
APOC1-208ENST00000592535 RPL6Q02878 288 aaKnown RBP14.4□□□□□ -0.1
APOC1-208ENST00000592535 ARID5AQ03989 594 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 KRT31Q15323 416 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 DCAF6Q58WW2 860 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 ZC3H12AQ5D1E8 599 aaKnown RBP14.4□□□□□ -0.1
APOC1-208ENST00000592535 MS4A13Q5J8X5 152 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 STPG1Q5TH74 334 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 OR6B2Q6IFH4 312 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 SERPINA13PQ6UXR4 307 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 SLC36A4Q6YBV0 504 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 AHI1Q8N157 1196 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 NOX5Q96PH1 765 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 SLC2A13Q96QE2 648 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 MKRN2Q9H000 416 aaKnown RBP14.4□□□□□ -0.1
APOC1-208ENST00000592535 VPS16Q9H269 839 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 ASNSD1Q9NWL6 643 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 ADAMTS9Q9P2N4 1935 aa14.4□□□□□ -0.1
APOC1-208ENST00000592535 ATXN2Q99700 1313 aaKnown RBP14.4□□□□□ -0.1
APOC1-208ENST00000592535 AP5Z1O43299 807 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 SYNCRIPO60506 623 aaKnown RBP14.39□□□□□ -0.11
APOC1-208ENST00000592535 HSF2BPO75031 334 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 EPHX1P07099 455 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 GLI1P08151 1106 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 HLA-EP13747 358 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 CYP11B1P15538 503 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 KLK7P49862 253 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 BPIFB4P59827 614 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 CDK17Q00537 523 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
APOC1-208ENST00000592535 E2F5Q15329 346 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 FNDC3BQ53EP0 1204 aaKnown RBP14.39□□□□□ -0.11
APOC1-208ENST00000592535 EFHC1Q5JVL4 640 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 SPDYCQ5MJ68 293 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 LYSMD4Q5XG99 296 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 RAP1GAP2Q684P5 730 aa14.39□□□□□ -0.11
APOC1-208ENST00000592535 MBLAC2Q68D91 279 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms