RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 EIF4HQ15056 248 aaKnown RBP20.96■□□□□ 0.95
CIRBP-239ENST00000592467 FAM183BPQ6ZVS7 135 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 ADIPOR2Q86V24 386 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 ERLEC1Q96DZ1 483 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 NUCKS1Q9H1E3 243 aaKnown RBP20.96■□□□□ 0.95
CIRBP-239ENST00000592467 SLC6A17Q9H1V8 727 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 VPS16Q9H269 839 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 CD93Q9NPY3 652 aa20.96■□□□□ 0.95
CIRBP-239ENST00000592467 BCCIPQ9P287 314 aaKnown RBP eCLIP20.96■□□□□ 0.95
CIRBP-239ENST00000592467 GOLGA6L22H0YM25 854 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 NPC1O15118 1278 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 EPHB6O15197 1021 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 TRUB2O95900 331 aaKnown RBP20.95■□□□□ 0.94
CIRBP-239ENST00000592467 RAPGEF1Q13905 1077 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 SDE2Q6IQ49 451 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 APTXQ7Z2E3 356 aaKnown RBP20.95■□□□□ 0.94
CIRBP-239ENST00000592467 ERMP1Q7Z2K6 904 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 DEFB106AQ8N104 65 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 MRGPRX1Q96LB2 322 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 TRIM62Q9BVG3 475 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 STK33Q9BYT3 514 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 ANO10Q9NW15 660 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
CIRBP-239ENST00000592467 F8VZ95 297 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 CAPN9O14815 690 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 TBL1XO60907 577 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 MBD3O95983 291 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 ZNF18P17022 549 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 PRKCHP24723 683 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 CD70P32970 193 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 KRT9P35527 623 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 BPIFB4P59827 614 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 STX1AQ16623 288 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 FUT11Q495W5 492 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 ZC3H12AQ5D1E8 599 aaKnown RBP20.94■□□□□ 0.94
CIRBP-239ENST00000592467 MS4A13Q5J8X5 152 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 CCDC183Q5T5S1 534 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 OTUD1Q5VV17 481 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-239ENST00000592467 SASS6Q6UVJ0 657 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 NOP9Q86U38 636 aaKnown RBP20.94■□□□□ 0.94
CIRBP-239ENST00000592467 PGBD3Q8N328 593 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 ADAM33Q9BZ11 813 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 VPS45Q9NRW7 570 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 ABCB8Q9NUT2 735 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 LIMA1Q9UHB6 759 aaKnown RBP20.94■□□□□ 0.94
CIRBP-239ENST00000592467 GGA2Q9UJY4 613 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 SIK3Q9Y2K2 1263 aa20.94■□□□□ 0.94
CIRBP-239ENST00000592467 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 IGHV1OR15-9A0A0B4J2B8 117 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 KCNU1A8MYU2 1149 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 PES1O00541 588 aaKnown RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 TIMM44O43615 452 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 FOXD2O60548 495 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 HSF2BPO75031 334 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 C7P10643 843 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 RPS24P62847 133 aaKnown RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 CREB5Q02930 508 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 PTPRNQ16849 979 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 DCAF6Q58WW2 860 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 EFHC1Q5JVL4 640 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 TCEAL6Q6IPX3 200 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 SLC26A9Q7LBE3 791 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 TMEFF1Q8IYR6 380 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 ZNF397Q8NF99 534 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 NETO1Q8TDF5 533 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 EPS8L1Q8TE68 723 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 WFIKKN2Q8TEU8 576 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 UCMAQ8WVF2 138 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 TCEAL3Q969E4 200 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 PRMT1Q99873 361 aaKnown RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 CIPCQ9C0C6 399 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 MKRN2Q9H000 416 aaKnown RBP20.93■□□□□ 0.94
CIRBP-239ENST00000592467 TMEM245Q9H330 911 aa20.93■□□□□ 0.94
CIRBP-239ENST00000592467 LRRC10BA6NIK2 292 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 SLC30A4O14863 429 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 GRAP2O75791 330 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 CAVIN2O95810 425 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 PABPC1P11940 636 aaKnown RBP20.92■□□□□ 0.94
CIRBP-239ENST00000592467 SDHBP21912 280 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 PTGER3P43115 390 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 GABRB2P47870 512 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 COPB1P53618 953 aaKnown RBP20.92■□□□□ 0.94
CIRBP-239ENST00000592467 COPAP53621 1224 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 JAM2P57087 298 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 SLC6A3Q01959 620 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 MYL5Q02045 173 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 OR6B2Q6IFH4 312 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 CHST9Q7L1S5 443 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 FIBINQ8TAL6 211 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 SPACA7Q96KW9 195 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 RTKNQ9BST9 563 aa20.92■□□□□ 0.94
CIRBP-239ENST00000592467 NOCTQ9UK39 431 aaKnown RBP20.92■□□□□ 0.94
CIRBP-239ENST00000592467 CDV3Q9UKY7 258 aaKnown RBP20.92■□□□□ 0.94
CIRBP-239ENST00000592467 INTS6Q9UL03 887 aaKnown RBP20.92■□□□□ 0.94
CIRBP-239ENST00000592467 DAB1O75553 588 aa20.91■□□□□ 0.94
CIRBP-239ENST00000592467 MOCS2O96007 188 aaPredicted RBP20.91■□□□□ 0.94
CIRBP-239ENST00000592467 LIMK1P53667 647 aa20.91■□□□□ 0.94
CIRBP-239ENST00000592467 BYSLQ13895 437 aaKnown RBP20.91■□□□□ 0.94
CIRBP-239ENST00000592467 FSCBQ5H9T9 825 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms