RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FAM228BP0C875 321 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 DESP17661 470 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 RFC1P35251 1148 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-212ENST00000590096 PTPN9P43378 593 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CXCR3P49682 368 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 KDSRQ06136 332 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-212ENST00000590096 FZD5Q13467 585 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CDO1Q16878 200 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CCDC14Q49A88 953 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CCDC122Q5T0U0 273 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 FYB2Q5VWT5 728 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 NADSYN1Q6IA69 706 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 GRAMD4Q6IC98 578 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 RFWD3Q6PCD5 774 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 NUDT18Q6ZVK8 323 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CHSY1Q86X52 802 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 SYNPOQ8N3V7 929 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 ADAM33Q9BZ11 813 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 FBRSL1Q9HCM7 1045 aaKnown RBP22.09■■□□□ 1.13
ATG4D-212ENST00000590096 RBM12Q9NTZ6 932 aaKnown RBP22.09■■□□□ 1.13
ATG4D-212ENST00000590096 DLGAP2Q9P1A6 1054 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 CALCOCO1Q9P1Z2 691 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 SCINQ9Y6U3 715 aa22.09■■□□□ 1.13
ATG4D-212ENST00000590096 KIAA1549LQ6ZVL6 1849 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 WDFY4Q6ZS81 3184 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 AKR1B10O60218 316 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 SLC6A4P31645 630 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 GRIA2P42262 883 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 NUBP1P53384 320 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 MAMLD1Q13495 774 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 C15orf59Q2T9L4 293 aaPredicted RBP22.08■■□□□ 1.13
ATG4D-212ENST00000590096 FBXO43Q4G163 708 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 PPP1R15BQ5SWA1 713 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 RAP1GAP2Q684P5 730 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 PLEKHA7Q6IQ23 1121 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 TC2NQ8N9U0 490 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 CCDC26Q8TAB7 109 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 CCDC42Q96M95 316 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 TKTL2Q9H0I9 626 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 CHRDQ9H2X0 955 aa22.08■■□□□ 1.13
ATG4D-212ENST00000590096 XPO7Q9UIA9 1087 aaKnown RBP22.08■■□□□ 1.13
ATG4D-212ENST00000590096 F5H5T6 163 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 KAT7O95251 611 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 ADCY5O95622 1261 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 TACR2P21452 398 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 DGKGP49619 791 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 RPL7AP62424 266 aaKnown RBP22.07■■□□□ 1.12
ATG4D-212ENST00000590096 GFPT1Q06210 699 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-212ENST00000590096 SLC18A3Q16572 532 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 PIK3R6Q5UE93 754 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 STRADAQ7RTN6 431 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 BNIPLQ7Z465 357 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 DTWD2Q8NBA8 298 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 HJURPQ8NCD3 748 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-212ENST00000590096 IER2Q9BTL4 223 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 NHEJ1Q9H9Q4 299 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-212ENST00000590096 MRPL47Q9HD33 250 aaKnown RBP22.07■■□□□ 1.12
ATG4D-212ENST00000590096 ARHGEF38Q9NXL2 777 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 MYO1AQ9UBC5 1043 aa22.07■■□□□ 1.12
ATG4D-212ENST00000590096 ZNF318Q5VUA4 2279 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 TBC1D3BA6NDS4 549 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 GFRA2O00451 464 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 TBL1XO60907 577 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 ENDOD1O94919 500 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 CDC25BP30305 580 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 ZNF143P52747 638 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-212ENST00000590096 ATXN1P54253 815 aaKnown RBP22.06■■□□□ 1.12
ATG4D-212ENST00000590096 MS4A13Q5J8X5 152 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 FAM131BQ86XD5 332 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 LGI2Q8N0V4 545 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 TERB1Q8NA31 727 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 FAM172AQ8WUF8 416 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 CHP1Q99653 195 aa22.06■■□□□ 1.12
ATG4D-212ENST00000590096 SPATA6Q9NWH7 488 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-212ENST00000590096 RNF40O75150 1001 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 PAGE1O75459 146 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 HOXD9P28356 352 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 ASTE1Q2TB18 679 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 ARL13BQ3SXY8 428 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 MPP7Q5T2T1 576 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 CCDC117Q8IWD4 279 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 PHTF2Q8N3S3 785 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 ZNF557Q8N988 423 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 CENPIQ92674 756 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 P2RY11Q96G91 374 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 PRICKLE1Q96MT3 831 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-212ENST00000590096 PRRX2Q99811 253 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 CNPY3Q9BT09 278 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 SLC2A11Q9BYW1 496 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 SIK2Q9H0K1 926 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 STIM2Q9P246 746 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 FBXO10Q9UK96 956 aa22.05■■□□□ 1.12
ATG4D-212ENST00000590096 TRIM24O15164 1050 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 CCP110O43303 1012 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 PSMA2P25787 234 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 SGSHP51688 502 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 MESP2Q0VG99 397 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 RABGAP1LQ5R372 815 aa22.04■■□□□ 1.12
ATG4D-212ENST00000590096 ACBD5Q5T8D3 534 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms