RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 MOCS2O96007 188 aaPredicted RBP17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 USP8P40818 1118 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 HARS2P49590 506 aaKnown RBP17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 IRAK1P51617 712 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 PDCLQ13371 301 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 FSCBQ5H9T9 825 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 PSAPL1Q6NUJ1 521 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 CHST9Q7L1S5 443 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 KIAA0907Q7Z7F0 614 aaPredicted RBP17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 CIR1Q86X95 450 aaPredicted RBP17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 FAM149B1Q96BN6 582 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 CPXM1Q96SM3 734 aa17.52■□□□□ 0.4
CROCCP3-203ENST00000589964 ACSL4O60488 711 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 GRAP2O75791 330 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 KCNK5O95279 499 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 CYBBP04839 570 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 CFIP05156 583 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 ENGP17813 658 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 GNA15P30679 374 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 GGCXP38435 758 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 CTSOP43234 321 aaPredicted RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 ZNF33AQ06730 810 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 CETN1Q12798 172 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 UAP1L1Q3KQV9 507 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 PREPLQ4J6C6 727 aaPredicted RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 ZC3H12AQ5D1E8 599 aaKnown RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 OTUD1Q5VV17 481 aaPredicted RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 SYT12Q8IV01 421 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 TMA16Q96EY4 203 aaKnown RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 MYO19Q96H55 970 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 USP36Q9P275 1121 aaKnown RBP17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 GGA2Q9UJY4 613 aa17.51■□□□□ 0.39
CROCCP3-203ENST00000589964 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 FBXO21O94952 628 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 IGLV3-25P01717 112 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 ERBB2P04626 1255 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 PABPC1P11940 636 aaKnown RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 TFE3P19532 575 aaPredicted RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 MTIF2P46199 727 aaKnown RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 KCNMA1Q12791 1236 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 LMAN2Q12907 356 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 STILQ15468 1287 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 SDE2Q6IQ49 451 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 GBP6Q6ZN66 633 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 C11orf74Q86VG3 221 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 SLC47A2Q86VL8 602 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 TMPRSS6Q8IU80 811 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 C1orf131Q8NDD1 294 aaKnown RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 TOE1Q96GM8 510 aaKnown RBP17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 TMEM245Q9H330 911 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 PRDM16Q9HAZ2 1276 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 CAPN10Q9HC96 672 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 APEX2Q9UBZ4 518 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 USP24Q9UPU5 2620 aa17.5■□□□□ 0.39
CROCCP3-203ENST00000589964 EPHX1P07099 455 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 SPINK2P20155 84 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 PMLP29590 882 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 CLCN1P35523 988 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 KLK7P49862 253 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 TPMTP51580 245 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 RING1Q06587 406 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 EIF4EBP2Q13542 120 aaPredicted RBP17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 EXOC3L4Q17RC7 722 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 PTPN20Q4JDL3 420 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 DCAF6Q58WW2 860 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 RAP1GAP2Q684P5 730 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 MBLAC2Q68D91 279 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 SERPINA13PQ6UXR4 307 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 NUDT18Q6ZVK8 323 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 FAM183BPQ6ZVS7 135 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 TMEM110Q86TL2 294 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 MLKLQ8NB16 471 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 GPR174Q9BXC1 333 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 SLC2A11Q9BYW1 496 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 TMEM9BQ9NQ34 198 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 ANLNQ9NQW6 1124 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 WSB2Q9NYS7 404 aaPredicted RBP17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 EVLQ9UI08 416 aaPredicted RBP17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 DNAJC12Q9UKB3 198 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 FHOD1Q9Y613 1164 aa17.49■□□□□ 0.39
CROCCP3-203ENST00000589964 I6L893 689 aaPredicted RBP17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 IRAK2O43187 625 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 FOXD2O60548 495 aaPredicted RBP17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 LATS1O95835 1130 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 NOVA1P51513 510 aaKnown RBP17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 FAM193AP78312 1265 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 BNC1Q01954 994 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 CAMK2GQ13555 558 aaPredicted RBP17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 FNDC3BQ53EP0 1204 aaKnown RBP17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 SH3PXD2AQ5TCZ1 1133 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 DEFB124Q8NES8 71 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 OR52K2Q8NGK3 314 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 GPT2Q8TD30 523 aa17.48■□□□□ 0.39
CROCCP3-203ENST00000589964 MRGPRX3Q96LB0 322 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms