RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 SIK2Q9H0K1 926 aa25.63■■□□□ 1.69
RFX1-205ENST00000589239 CLEC1BQ9P126 229 aa25.63■■□□□ 1.69
RFX1-205ENST00000589239 MRPS23Q9Y3D9 190 aaKnown RBP25.63■■□□□ 1.69
RFX1-205ENST00000589239 CPQQ9Y646 472 aa25.63■■□□□ 1.69
RFX1-205ENST00000589239 DENND4CQ5VZ89 1909 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 EFCAB8A8MWE9 144 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 PGRMC1O00264 195 aaKnown RBP25.62■■□□□ 1.69
RFX1-205ENST00000589239 IRF1P10914 325 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 GPR149Q86SP6 731 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 ITFG1Q8TB96 612 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 SLITRK6Q9H5Y7 841 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 CLDND1Q9NY35 253 aa25.62■■□□□ 1.69
RFX1-205ENST00000589239 FEZ2Q9UHY8 353 aaPredicted RBP25.62■■□□□ 1.69
RFX1-205ENST00000589239 TTC7AQ9ULT0 858 aaPredicted RBP25.62■■□□□ 1.69
RFX1-205ENST00000589239 TRAV19A0A0A6YYK7 116 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 TCRBV7S2A1N4TA0A589 114 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 ZNF197O14709 1029 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 TBX10O75333 385 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 CEBPBP17676 345 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 LONRF2Q1L5Z9 754 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 SLC13A5Q86YT5 568 aaPredicted RBP25.61■■□□□ 1.69
RFX1-205ENST00000589239 MNS1Q8NEH6 495 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 HAPLN3Q96S86 360 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 SMG9Q9H0W8 520 aaKnown RBP25.61■■□□□ 1.69
RFX1-205ENST00000589239 RNF14Q9UBS8 474 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 OR12D3Q9UGF7 316 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 hCG_1818297A0A087WSY0 165 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 CREB3O43889 395 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 STC2O76061 302 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 GOT1P17174 413 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 PAFAH1B1P43034 410 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 COPS2P61201 443 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 TAZQ16635 292 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 CTC1Q2NKJ3 1217 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 ARHGAP15Q53QZ3 475 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 NUGGCQ68CJ6 796 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 POTEHQ6S545 545 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 WBP2Q969T9 261 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 TASP1Q9H6P5 420 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 CWC15Q9P013 229 aaKnown RBP25.61■■□□□ 1.69
RFX1-205ENST00000589239 HS3ST4Q9Y661 456 aa25.61■■□□□ 1.69
RFX1-205ENST00000589239 C2orf16Q68DN1 1984 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 CETN2P41208 172 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 SLC7A9P82251 487 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 CBX2Q14781 532 aaPredicted RBP25.6■■□□□ 1.69
RFX1-205ENST00000589239 PPP2R5EQ16537 467 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 TTC16Q8NEE8 873 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 PLD4Q96BZ4 506 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 BTN2A3PQ96KV6 586 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 GAS2L1Q99501 681 aaPredicted RBP25.6■■□□□ 1.69
RFX1-205ENST00000589239 DDX6P26196 483 aaKnown RBP eCLIP25.6■■□□□ 1.69
RFX1-205ENST00000589239 SEMA3BQ13214 749 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 PIK3R6Q5UE93 754 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 UNC45BQ8IWX7 931 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 ZDHHC14Q8IZN3 488 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 CMTM8Q8IZV2 173 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 ATP6V0D2Q8N8Y2 350 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 ZSWIM3Q96MP5 696 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 ZNF670Q9BS34 389 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 CARD6Q9BX69 1037 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 OSBPL2Q9H1P3 480 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 SLC12A6Q9UHW9 1150 aa25.6■■□□□ 1.69
RFX1-205ENST00000589239 KLKB1P03952 638 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 HOXB8P17481 243 aaPredicted RBP25.59■■□□□ 1.69
RFX1-205ENST00000589239 HARS2P49590 506 aaKnown RBP25.59■■□□□ 1.69
RFX1-205ENST00000589239 GPS2Q13227 327 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 ANKRD20A8PQ5CZ79 823 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 ADAMTS19Q8TE59 1207 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 CSPG4P5Q96PW8 444 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 AP1M1Q9BXS5 423 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 NR2E1Q9Y466 385 aa25.59■■□□□ 1.69
RFX1-205ENST00000589239 PFKLP17858 780 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 PTPN7P35236 360 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 AVPR1AP37288 418 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 ARL4AP40617 200 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 DENND1CQ8IV53 801 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 PRUNE2Q8WUY3 3088 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 SCAMP3O14828 347 aaKnown RBP25.58■■□□□ 1.69
RFX1-205ENST00000589239 LRIG2O94898 1065 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 CORO1AP31146 461 aaKnown RBP25.58■■□□□ 1.69
RFX1-205ENST00000589239 LTBRP36941 435 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 DYNLT1P63172 113 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 CKAP4Q07065 602 aaKnown RBP25.58■■□□□ 1.69
RFX1-205ENST00000589239 KLF1Q13351 362 aaPredicted RBP25.58■■□□□ 1.69
RFX1-205ENST00000589239 MS4A13Q5J8X5 152 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 Q7L0L9 218 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 RFX6Q8HWS3 928 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 PCDH19Q8TAB3 1148 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 RNF157Q96PX1 679 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 MAK16Q9BXY0 300 aaKnown RBP25.58■■□□□ 1.69
RFX1-205ENST00000589239 CCL26Q9Y258 94 aa25.58■■□□□ 1.69
RFX1-205ENST00000589239 MLLT6P55198 1093 aaPredicted RBP25.57■■□□□ 1.68
RFX1-205ENST00000589239 FAF2Q96CS3 445 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 NAP1L3Q99457 506 aaPredicted RBP25.57■■□□□ 1.68
RFX1-205ENST00000589239 ADAM7Q9H2U9 754 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 EEF2KO00418 725 aaKnown RBP25.57■■□□□ 1.68
RFX1-205ENST00000589239 POLR3GO15318 223 aaPredicted RBP25.57■■□□□ 1.68
RFX1-205ENST00000589239 CST8O60676 142 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 C14orf80Q86SX3 495 aa25.57■■□□□ 1.68
RFX1-205ENST00000589239 VSIG1Q86XK7 387 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms