RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 HBS1LQ9Y450 684 aaKnown RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 PLXNA2O75051 1894 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 TIMM44O43615 452 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 BCAT1P54687 386 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 ADIGQ0VDE8 80 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 E2F5Q15329 346 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 PKDCCQ504Y2 493 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 MPPE1Q53F39 396 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 IL27RAQ6UWB1 636 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 FAM124AQ86V42 546 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 SMYD4Q8IYR2 804 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-204ENST00000588687 ZNF366Q8N895 744 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 WFDC5Q8TCV5 224 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 CYB5D2Q8WUJ1 264 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 DNAI2Q9GZS0 605 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 LHX5Q9H2C1 402 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 OSGEPQ9NPF4 335 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 OLA1Q9NTK5 396 aaKnown RBP19.23■□□□□ 0.67
CCDC43-204ENST00000588687 COQ4Q9Y3A0 265 aa19.23■□□□□ 0.67
CCDC43-204ENST00000588687 YJEFN3A6XGL0 299 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 E7ENQ6 273 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 FLRT2O43155 660 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 MSI1O43347 362 aaKnown RBP19.22■□□□□ 0.67
CCDC43-204ENST00000588687 GABBR2O75899 941 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 LATS1O95835 1130 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 IGLV3-27P01718 113 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 ACADMP11310 421 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 CSNK1EP49674 416 aaKnown RBP19.22■□□□□ 0.67
CCDC43-204ENST00000588687 AFF3P51826 1226 aaKnown RBP19.22■□□□□ 0.67
CCDC43-204ENST00000588687 ACAP1Q15027 740 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 KIF19Q2TAC6 998 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 TMPRSS7Q7RTY8 843 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 MDM1Q8TC05 714 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 WFIKKN2Q8TEU8 576 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 SPATA32Q96LK8 384 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 ABCB8Q9NUT2 735 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 SFMBT1Q9UHJ3 866 aa19.22■□□□□ 0.67
CCDC43-204ENST00000588687 O00370 1275 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 TSPAN3O60637 253 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 ATXN1LP0C7T5 689 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 HARS2P49590 506 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 ZNF445P59923 1031 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 RPS14P62263 151 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 BST2Q10589 180 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 CUL2Q13617 745 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 ADGRF1Q5T601 910 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 BSPRYQ5W0U4 402 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 MSANTD2Q6P1R3 559 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 LAYNQ6UX15 382 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 CHST9Q7L1S5 443 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 SCML4Q8N228 414 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 SETD7Q8WTS6 366 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 EDEM1Q92611 657 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 MYO19Q96H55 970 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 LMLNQ96KR4 655 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 CCDC86Q9H6F5 360 aaKnown RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 TM9SF3Q9HD45 589 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 PRSS16Q9NQE7 514 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 DKK4Q9UBT3 224 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 GGA2Q9UJY4 613 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 SNX11Q9Y5W9 270 aa19.21■□□□□ 0.67
CCDC43-204ENST00000588687 COL5A1P20908 1838 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-204ENST00000588687 KALRNO60229 2985 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 C10orf142B7Z368 130 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
CCDC43-204ENST00000588687 PABPC1P11940 636 aaKnown RBP19.2■□□□□ 0.66
CCDC43-204ENST00000588687 GRIA4P48058 902 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 DAOAP59103 153 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 FNDC3BQ53EP0 1204 aaKnown RBP19.2■□□□□ 0.66
CCDC43-204ENST00000588687 FAM133BQ5BKY9 247 aaKnown RBP19.2■□□□□ 0.66
CCDC43-204ENST00000588687 KCNT1Q5JUK3 1230 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 AHI1Q8N157 1196 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 SPRYD3Q8NCJ5 442 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 KCTD13Q8WZ19 329 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
CCDC43-204ENST00000588687 BIRC7Q96CA5 298 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 FBRSQ9HAH7 460 aa19.2■□□□□ 0.66
CCDC43-204ENST00000588687 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 SEMA4FO95754 770 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 DLDP09622 509 aaKnown RBP19.19■□□□□ 0.66
CCDC43-204ENST00000588687 EPB41P11171 864 aaKnown RBP19.19■□□□□ 0.66
CCDC43-204ENST00000588687 CD70P32970 193 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 SLC8A3P57103 927 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 KRT85P78386 507 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 ZBTB16Q05516 673 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 CAMK2BQ13554 666 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 SGO2Q562F6 1265 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 C19orf48Q6RUI8 117 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 MARCH9Q86YJ5 346 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 SNX19Q92543 992 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 PRICKLE1Q96MT3 831 aaPredicted RBP19.19■□□□□ 0.66
CCDC43-204ENST00000588687 ZSWIM1Q9BR11 485 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 CNGB3Q9NQW8 809 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 ANKRD6Q9Y2G4 727 aa19.19■□□□□ 0.66
CCDC43-204ENST00000588687 GOLGA4Q13439 2230 aaKnown RBP19.19■□□□□ 0.66
CCDC43-204ENST00000588687 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms