RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ASNSD1Q9NWL6 643 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 STIM2Q9P246 746 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 TJP2Q9UDY2 1190 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 SLC12A6Q9UHW9 1150 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 HSF2BPO75031 334 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 CYP11B1P15538 503 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 NDUFV2P19404 249 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 HLA-FP30511 346 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 SLC6A4P31645 630 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 IL12RB1P42701 662 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 ATXN1P54253 815 aaKnown RBP20.3■□□□□ 0.84
TPM4-208ENST00000588410 ZNF234Q14588 700 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 TAF5Q15542 800 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 ZC3H12AQ5D1E8 599 aaKnown RBP20.3■□□□□ 0.84
TPM4-208ENST00000588410 PLA2G2CQ5R387 149 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 NADSYN1Q6IA69 706 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 DPY19L2P1Q6NXN4 242 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 KIAA1324Q6UXG2 1013 aaKnown RBP20.3■□□□□ 0.84
TPM4-208ENST00000588410 SLC36A4Q6YBV0 504 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 CHST9Q7L1S5 443 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 DEFB106AQ8N104 65 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 AHI1Q8N157 1196 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 TMEM35BQ8NCS4 154 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 RNF34Q969K3 372 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 STK33Q9BYT3 514 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 SMOC1Q9H4F8 434 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 PLCB1Q9NQ66 1216 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 GGA2Q9UJY4 613 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 PLA2G4CQ9UP65 541 aa20.3■□□□□ 0.84
TPM4-208ENST00000588410 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 PABPC1P11940 636 aaKnown RBP20.29■□□□□ 0.84
TPM4-208ENST00000588410 SGSHP51688 502 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 MYL5Q02045 173 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 SERPINA13PQ6UXR4 307 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 FAM183BPQ6ZVS7 135 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 MFN1Q8IWA4 741 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 TMEFF1Q8IYR6 380 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 FRMD1Q8N878 549 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 ATP6V0D2Q8N8Y2 350 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 SORCS1Q8WY21 1168 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 NAA15Q9BXJ9 866 aaKnown RBP20.29■□□□□ 0.84
TPM4-208ENST00000588410 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.29■□□□□ 0.847e-12■■■■■ 49
TPM4-208ENST00000588410 MBD1Q9UIS9 605 aaPredicted RBP20.29■□□□□ 0.84
TPM4-208ENST00000588410 CYP8B1Q9UNU6 501 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 ZNF292O60281 2723 aa20.29■□□□□ 0.84
TPM4-208ENST00000588410 ATG2BQ96BY7 2078 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 SYNJ2BP-COX16A0A087WUM0 186 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 AP5Z1O43299 807 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 GDF9O60383 454 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 GRAP2O75791 330 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 ERBB2P04626 1255 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 ATP5BP06576 529 aaKnown RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 EPHX1P07099 455 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 SLC2A3P11169 496 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 SLC6A3Q01959 620 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 RPL6Q02878 288 aaKnown RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 FUT11Q495W5 492 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 FNDC3BQ53EP0 1204 aaKnown RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 MS4A13Q5J8X5 152 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 SPDYCQ5MJ68 293 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 TAF3Q5VWG9 929 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 TMEM215Q68D42 235 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 ARMCX6Q7L4S7 300 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 CHSY1Q86X52 802 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 ZDHHC17Q8IUH5 632 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■■■□□ 18.9
TPM4-208ENST00000588410 PIGKQ92643 395 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 BTN2A3PQ96KV6 586 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 MRGPRX1Q96LB2 322 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 PCMTD1Q96MG8 357 aaPredicted RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 SLC2A13Q96QE2 648 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 NUCKS1Q9H1E3 243 aaKnown RBP20.28■□□□□ 0.84
TPM4-208ENST00000588410 CD248Q9HCU0 757 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 DDIT4Q9NX09 232 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 COX16Q9P0S2 106 aa20.28■□□□□ 0.84
TPM4-208ENST00000588410 F8VZ95 297 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 SLC30A4O14863 429 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 IGLV3-25P01717 112 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 POLR2EP19388 210 aaKnown RBP20.27■□□□□ 0.84
TPM4-208ENST00000588410 ABCB4P21439 1286 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 CCR1P32246 355 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 DPP6P42658 865 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 RPS24P62847 133 aaKnown RBP20.27■□□□□ 0.84
TPM4-208ENST00000588410 CDH18Q13634 790 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 ENPP2Q13822 863 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 PTPN20Q4JDL3 420 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 LYSMD4Q5XG99 296 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 RAP1GAP2Q684P5 730 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 MBLAC2Q68D91 279 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 IL31Q6EBC2 164 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 OLFML1Q6UWY5 402 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 LGI2Q8N0V4 545 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 CARNMT1Q8N4J0 409 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 CYB5D2Q8WUJ1 264 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 PRICKLE1Q96MT3 831 aaPredicted RBP20.27■□□□□ 0.84
TPM4-208ENST00000588410 SLC6A17Q9H1V8 727 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 PRDM16Q9HAZ2 1276 aa20.27■□□□□ 0.84
TPM4-208ENST00000588410 FAM207AQ9NSI2 230 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms