RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 SRFP11831 508 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 TACR2P21452 398 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC11A2P49281 568 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 TAS2R40P59535 323 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC25A11Q02978 314 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 KIF5AQ12840 1032 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 RUNX3Q13761 415 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 DHCR24Q15392 516 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 LY6G5CQ5SRR4 150 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 ARTNQ5T4W7 220 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 ADGRF1Q5T601 910 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLFN11Q7Z7L1 901 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 PYROXD2Q8N2H3 581 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 CPXM2Q8N436 756 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 TPCN2Q8NHX9 752 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 IRF7Q92985 503 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 BHMTQ93088 406 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SIK2Q9H0K1 926 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 ECT2Q9H8V3 914 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SPHK2Q9NRA0 654 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 GPATCH2LQ9NWQ4 482 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC12A6Q9UHW9 1150 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 FZD10Q9ULW2 581 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 USP18Q9UMW8 372 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 FAM72CH0Y354 149 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 PRPSAP2O60256 369 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 DESP17661 470 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 COMTP21964 271 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 PCK1P35558 622 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 CHKAP35790 457 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 SOX9P48436 509 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 MLLT6P55198 1093 aaPredicted RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 AUHQ13825 339 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 CA9Q16790 459 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 SMTNL2Q2TAL5 461 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ARL13BQ3SXY8 428 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 KCNT1Q5JUK3 1230 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 FAM72AQ5TYM5 149 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 NAIF1Q69YI7 327 aaPredicted RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 FAM72DQ6L9T8 149 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ZNF662Q6ZS27 426 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 CHSY1Q86X52 802 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 FAM72BQ86X60 149 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 REXO1L1PQ8IX06 675 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ZNF683Q8IZ20 524 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 LGI2Q8N0V4 545 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 CFAP52Q8N1V2 620 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 IGSF8Q969P0 613 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 NTAN1Q96AB6 310 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 CHFRQ96EP1 664 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 PRICKLE1Q96MT3 831 aaPredicted RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 HAPLN3Q96S86 360 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 SNRNP25Q9BV90 132 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 LZTFL1Q9NQ48 299 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 TRPV5Q9NQA5 729 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 HEBP1Q9NRV9 189 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 TMEM51Q9NW97 253 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 PLK2Q9NYY3 685 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 VANGL2Q9ULK5 521 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 GUCA1BQ9UMX6 200 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 ALG6Q9Y672 507 aa11.08□□□□□ -0.64
SMARCA4-213ENST00000587988 GRID2IPA4D2P6 1211 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 USP27XA6NNY8 438 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 SLC34A2O95436 690 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 NFATC1O95644 943 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 RARAP10276 462 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 MAN1A1P33908 653 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 GJA4P35212 333 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 SSR1P43307 286 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 IRAK1P51617 712 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 RPS24P62847 133 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 SCAPQ12770 1279 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 ANO4Q32M45 955 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 ITPRIPL2Q3MIP1 535 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 FYB2Q5VWT5 728 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 FBXL22Q6P050 247 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 C12orf40Q86WS4 652 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 TXLNBQ8N3L3 684 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 CPA6Q8N4T0 437 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 NAT16Q8N8M0 369 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 LRRC57Q8N9N7 239 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 CSGALNACT1Q8TDX6 532 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 DNASE1L2Q92874 299 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 TMA16Q96EY4 203 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 C1orf74Q96LT6 269 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 NCAPGQ9BPX3 1015 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 DDX50Q9BQ39 737 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 TSGA10Q9BZW7 698 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 OSBPL2Q9H1P3 480 aa11.07□□□□□ -0.64
SMARCA4-213ENST00000587988 TRMT1Q9NXH9 659 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms