RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 HLA-FP30511 346 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 SNX16P57768 344 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 ZNF234Q14588 700 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 TAF5Q15542 800 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 TMEM215Q68D42 235 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 NADSYN1Q6IA69 706 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 OR6B2Q6IFH4 312 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 CYP2U1Q7Z449 544 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 TMEFF1Q8IYR6 380 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 WFIKKN2Q8TEU8 576 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 SORCS1Q8WY21 1168 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 SLC39A13Q96H72 371 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 SLC6A17Q9H1V8 727 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 PLCB1Q9NQ66 1216 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 ABCB8Q9NUT2 735 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 ANO10Q9NW15 660 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 STIM2Q9P246 746 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 ABCA7Q8IZY2 2146 aa18.38■□□□□ 0.53
TPM4-206ENST00000587201 ZNF217O75362 1048 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 MBD3O95983 291 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 APOEP02649 317 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 GLI1P08151 1106 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 UCHL3P15374 230 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 KRT31Q15323 416 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 EFHC1Q5JVL4 640 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 MPP7Q5T2T1 576 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 CDKAL1Q5VV42 579 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 KIAA1324Q6UXG2 1013 aaKnown RBP18.37■□□□□ 0.53
TPM4-206ENST00000587201 SLC36A4Q6YBV0 504 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
TPM4-206ENST00000587201 FAM183BPQ6ZVS7 135 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 CHST9Q7L1S5 443 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 ARMCX6Q7L4S7 300 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 DEFB106AQ8N104 65 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 MRGPRX1Q96LB2 322 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 ASNSD1Q9NWL6 643 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 GGA2Q9UJY4 613 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 CYP8B1Q9UNU6 501 aa18.37■□□□□ 0.53
TPM4-206ENST00000587201 DCDC2BA2VCK2 349 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 SLC30A4O14863 429 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 SYNCRIPO60506 623 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 HSF2BPO75031 334 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 GRAP2O75791 330 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 ERBB2P04626 1255 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 PITX1P78337 314 aaPredicted RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 CDK17Q00537 523 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 RPL6Q02878 288 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 ENPP2Q13822 863 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 STX1AQ16623 288 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 FUT11Q495W5 492 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 ZC3H12AQ5D1E8 599 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 TCEAL6Q6IPX3 200 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 SERPINA13PQ6UXR4 307 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 THADAQ6YHU6 1953 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■□□ 19.1
TPM4-206ENST00000587201 ZNF557Q8N988 423 aaPredicted RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 WFDC5Q8TCV5 224 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 PIGKQ92643 395 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 TCEAL3Q969E4 200 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 PRICKLE1Q96MT3 831 aaPredicted RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 NAA15Q9BXJ9 866 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
TPM4-206ENST00000587201 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 RXFP3Q9NSD7 469 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 FANCLQ9NW38 375 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 PLA2G4CQ9UP65 541 aa18.36■□□□□ 0.53
TPM4-206ENST00000587201 SYNJ2BP-COX16A0A087WUM0 186 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 IGHV1OR15-9A0A0B4J2B8 117 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 AP5Z1O43299 807 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 IGLV3-25P01717 112 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 EPHX1P07099 455 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 CYP11B1P15538 503 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 CD70P32970 193 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 PTGER3P43115 390 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 PTPN20Q4JDL3 420 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 FNDC3BQ53EP0 1204 aaKnown RBP18.35■□□□□ 0.53
TPM4-206ENST00000587201 MS4A13Q5J8X5 152 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 SPDYCQ5MJ68 293 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 LYSMD4Q5XG99 296 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 MBLAC2Q68D91 279 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 OLFML1Q6UWY5 402 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
TPM4-206ENST00000587201 ATP6V0D2Q8N8Y2 350 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 TMEM35BQ8NCS4 154 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 CYB5D2Q8WUJ1 264 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 RNF34Q969K3 372 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 MYEOVQ96EZ4 313 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 STK33Q9BYT3 514 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
TPM4-206ENST00000587201 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.537e-12■■■■■ 49
TPM4-206ENST00000587201 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms