RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SIK2Q9H0K1 926 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 TRPV5Q9NQA5 729 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 SPHK2Q9NRA0 654 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 PIGVQ9NUD9 493 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 UVRAGQ9P2Y5 699 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 IP6K2Q9UHH9 426 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
TRAF4-215ENST00000584944 EP300Q09472 2414 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 WDR87Q6ZQQ6 2873 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ANAPC1Q9H1A4 1944 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 TMEM191CA6NGB0 347 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 KCNU1A8MYU2 1149 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 EIF3CLB5ME19 914 aaKnown RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 F5H5T6 163 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 PRPSAP2O60256 369 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ACSL4O60488 711 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 CYP1A2P05177 515 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 PRKCQQ04759 706 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 PIGHQ14442 188 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 DHCR24Q15392 516 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ASTE1Q2TB18 679 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 MPPE1Q53F39 396 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 LY6G5CQ5SRR4 150 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ZFYVE27Q5T4F4 411 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 FAM131BQ86XD5 332 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ADGRG2Q8IZP9 1017 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 TMA16Q96EY4 203 aaKnown RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 PGAP3Q96FM1 320 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 FCRL2Q96LA5 508 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
TRAF4-215ENST00000584944 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
TRAF4-215ENST00000584944 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-215ENST00000584944 SPECC1L-ADORA2AF8WAN1 911 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 CCP110O43303 1012 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 TSPAN3O60637 253 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 IGLV3-27P01718 113 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 KLKB1P03952 638 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 CYP17A1P05093 508 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 CXCR3P49682 368 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 PITX1P78337 314 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-215ENST00000584944 GRSF1Q12849 480 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAF4-215ENST00000584944 UBXN2BQ14CS0 331 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 ODF2Q5BJF6 829 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 EFHC2Q5JST6 749 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 Q6ZNB5 142 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 LGI2Q8N0V4 545 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 HJURPQ8NCD3 748 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-215ENST00000584944 OLIG1Q8TAK6 271 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 RIN3Q8TB24 985 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 NT5C3BQ969T7 300 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 AZIN2Q96A70 460 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 DLGAP2Q9P1A6 1054 aa14.36□□□□□ -0.11
TRAF4-215ENST00000584944 TRDMT1O14717 391 aaKnown RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 NCAM2O15394 837 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 ARHGAP6O43182 974 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 PAGE1O75459 146 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 IGLV3-25P01717 112 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 TFE3P19532 575 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 MLLT6P55198 1093 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 KIF5AQ12840 1032 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 ACAP1Q15027 740 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 HADHQ16836 314 aaKnown RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 PPP1R15BQ5SWA1 713 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 SLFN11Q7Z7L1 901 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 TMEM25Q86YD3 366 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 LRRC8AQ8IWT6 810 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 CPXM2Q8N436 756 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 ZNF557Q8N988 423 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 CCDC26Q8TAB7 109 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 SLC35G2Q8TBE7 412 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 RFFLQ8WZ73 363 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 FAM3CQ92520 227 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 WBP2Q969T9 261 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 NELL2Q99435 816 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 P2RY13Q9BPV8 354 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 HPS4Q9NQG7 708 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 STIM2Q9P246 746 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 DEC1Q9P2X7 70 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
TRAF4-215ENST00000584944 DCHS1Q96JQ0 3298 aa14.35□□□□□ -0.11
TRAF4-215ENST00000584944 ZNF292O60281 2723 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 TCRBV5S1A1TA0A578 114 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 TBL1XO60907 577 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 SRGAP2O75044 1071 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 LCA5LO95447 670 aa14.34□□□□□ -0.11
TRAF4-215ENST00000584944 DCNP07585 359 aaKnown RBP14.34□□□□□ -0.11
TRAF4-215ENST00000584944 TYRP14679 529 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms