RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
PGAP3-209ENST00000584620 SFMBT1Q9UHJ3 866 aa11.3□□□□□ -0.6
PGAP3-209ENST00000584620 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
PGAP3-209ENST00000584620 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
PGAP3-209ENST00000584620 APOBEC2Q9Y235 224 aaKnown RBP11.3□□□□□ -0.6
PGAP3-209ENST00000584620 FAM149AA5PLN7 773 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 O00370 1275 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 ARHGAP6O43182 974 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 TSPAN3O60637 253 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 NDUFS2O75306 463 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 IGLV3-19P01714 112 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 C7P10643 843 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 NCAM1P13591 858 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 HLA-FP30511 346 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 TPMTP51580 245 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 SGSHP51688 502 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 FKBP3Q00688 224 aaKnown RBP11.29□□□□□ -0.6
PGAP3-209ENST00000584620 BNC1Q01954 994 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
PGAP3-209ENST00000584620 GRIK2Q13002 908 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 STARD3Q14849 445 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
PGAP3-209ENST00000584620 PLEKHG6Q3KR16 790 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 SGO2Q562F6 1265 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 SYCP2LQ5T4T6 812 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 ZNF658Q5TYW1 1059 aaPredicted RBP11.29□□□□□ -0.6
PGAP3-209ENST00000584620 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 RGL4Q8IZJ4 473 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 DDI1Q8WTU0 396 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 EDEM1Q92611 657 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 GSDMAQ96QA5 445 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 GPR174Q9BXC1 333 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 SLC2A11Q9BYW1 496 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 CIPCQ9C0C6 399 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 HBS1LQ9Y450 684 aaKnown RBP11.29□□□□□ -0.6
PGAP3-209ENST00000584620 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
PGAP3-209ENST00000584620 RNF225M0QZC1 329 aaPredicted RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 MSI1O43347 362 aaKnown RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SYNCRIPO60506 623 aaKnown RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 CYBBP04839 570 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SYPP08247 313 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 VDRP11473 427 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 HLA-EP13747 358 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 CD19P15391 556 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SLC8A3P57103 927 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 DAOAP59103 153 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 LRMPQ12912 555 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SLC14A1Q13336 389 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 MPPE1Q53F39 396 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 TMPRSS7Q7RTY8 843 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 ADIPOR2Q86V24 386 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SCML4Q8N228 414 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SLC35F5Q8WV83 523 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 KCTD13Q8WZ19 329 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 KAT5Q92993 513 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 TMEM245Q9H330 911 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SUSD2Q9UGT4 822 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
PGAP3-209ENST00000584620 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 SLCO1B1Q9Y6L6 691 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
PGAP3-209ENST00000584620 TENM4Q6N022 2769 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 METTL12A8MUP2 240 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 TIMM44O43615 452 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 CALCAP01258 141 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 EPHX1P07099 455 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 GNSP15586 552 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
PGAP3-209ENST00000584620 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.61
PGAP3-209ENST00000584620 RGS7P49802 495 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 LRRC63Q05C16 580 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
PGAP3-209ENST00000584620 PTPRNQ16849 979 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 ADGRF1Q5T601 910 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 DCAF12L1Q5VU92 463 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 PMF1Q6P1K2 205 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 MSANTD2Q6P1R3 559 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 CACUL1Q86Y37 369 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.61
PGAP3-209ENST00000584620 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.27□□□□□ -0.61
PGAP3-209ENST00000584620 LMO3Q8TAP4 145 aa11.27□□□□□ -0.61
PGAP3-209ENST00000584620 WFDC5Q8TCV5 224 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms