RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CHKAP35790 457 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 IFNAR2P48551 515 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 ZNF135P52742 658 aaPredicted RBP18.95■□□□□ 0.62
RFFL-211ENST00000584541 RWDD2BP57060 319 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 PDK2Q15119 407 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 MS4A13Q5J8X5 152 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 TXNRD3NBQ6F5E7 133 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 LRRC31Q6UY01 552 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 CYP4V2Q6ZWL3 525 aaPredicted RBP18.95■□□□□ 0.62
RFFL-211ENST00000584541 CHSY1Q86X52 802 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 MAP7D3Q8IWC1 876 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 MFSD6LQ8IWD5 586 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 ZDHHC14Q8IZN3 488 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 KCTD6Q8NC69 237 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 DEPDC1BQ8WUY9 529 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 HES6Q96HZ4 224 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 EPAS1Q99814 870 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 KXD1Q9BQD3 176 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 ANLNQ9NQW6 1124 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 GPATCH2LQ9NWQ4 482 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 OR12D3Q9UGF7 316 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 XPO7Q9UIA9 1087 aaKnown RBP18.95■□□□□ 0.62
RFFL-211ENST00000584541 STOML2Q9UJZ1 356 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 PACSIN2Q9UNF0 486 aaPredicted RBP18.95■□□□□ 0.62
RFFL-211ENST00000584541 HS3ST4Q9Y661 456 aa18.95■□□□□ 0.62
RFFL-211ENST00000584541 F5H5T6 163 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 KIF2AO00139 706 aaPredicted RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 SCAMP3O14828 347 aaKnown RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 GREM1O60565 184 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 KRT1P04264 644 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 TUBB4AP04350 444 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 IL9P15248 144 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 TACR2P21452 398 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 L1CAMP32004 1257 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 ARL4AP40617 200 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 CETN2P41208 172 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 MLLT6P55198 1093 aaPredicted RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 CDH6P55285 790 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 DPYSL2Q16555 572 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 PPP6R3Q5H9R7 873 aaPredicted RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 PIK3R6Q5UE93 754 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 RAP1GAP2Q684P5 730 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 PARM1Q6UWI2 310 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 VITQ6UXI7 678 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 BBS7Q8IWZ6 715 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 KATNAL2Q8IYT4 538 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 KRT35Q92764 455 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 FGF14Q92915 247 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 NXPE3Q969Y0 559 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 RSPRY1Q96DX4 576 aa18.94■□□□□ 0.62
RFFL-211ENST00000584541 RBM41Q96IZ5 413 aaKnown RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 C16orf45Q96MC5 204 aaPredicted RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
RFFL-211ENST00000584541 TYW5A2RUC4 315 aaKnown RBP18.93■□□□□ 0.62
RFFL-211ENST00000584541 LRRD1A4D1F6 860 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 ANHXE9PGG2 379 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 I6L893 689 aaPredicted RBP18.93■□□□□ 0.62
RFFL-211ENST00000584541 CREB3O43889 395 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 ZRANB2O95218 330 aaKnown RBP eCLIP18.93■□□□□ 0.626e-6■■■■□ 21
RFFL-211ENST00000584541 PSMC3P17980 439 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 DNA2P51530 1060 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 ETF1P62495 437 aaKnown RBP18.93■□□□□ 0.62
RFFL-211ENST00000584541 NRG1Q02297 640 aaPredicted RBP18.93■□□□□ 0.62
RFFL-211ENST00000584541 HTR4Q13639 388 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 AUHQ13825 339 aaKnown RBP18.93■□□□□ 0.62
RFFL-211ENST00000584541 ATP13A4Q4VNC1 1196 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 RABGAP1LQ5R372 815 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 NADSYN1Q6IA69 706 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 NYAP1Q6ZVC0 841 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 RCOR2Q8IZ40 523 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 CPXM2Q8N436 756 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 EXD1Q8NHP7 514 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 RIN3Q8TB24 985 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 OSCP1Q8WVF1 389 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 KLHL11Q9NVR0 708 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 NUMBLQ9Y6R0 609 aa18.93■□□□□ 0.62
RFFL-211ENST00000584541 DOCK4Q8N1I0 1966 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 GOLGA6L7A0A1B0GV03 622 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 CTAGE9A4FU28 777 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 E9PAM4 449 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 H3BRJ5 948 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 SRGAP2O75044 1071 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 CYBBP04839 570 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 KDELR1P24390 212 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 HTR7P34969 479 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 MARCKSL1P49006 195 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 TPI1P60174 286 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 FCHO2Q0JRZ9 810 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 PDGFRLQ15198 375 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 CA9Q16790 459 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 FAM133BQ5BKY9 247 aaKnown RBP18.92■□□□□ 0.62
RFFL-211ENST00000584541 CCDC50Q8IVM0 306 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 FAM217AQ8IXS0 508 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 LGI2Q8N0V4 545 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 PYROXD2Q8N2H3 581 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 ST13P5Q8NFI4 369 aaPredicted RBP18.92■□□□□ 0.62
RFFL-211ENST00000584541 LRRC3BQ96PB8 259 aa18.92■□□□□ 0.62
RFFL-211ENST00000584541 KCTD15Q96SI1 283 aaPredicted RBP18.92■□□□□ 0.62
RFFL-211ENST00000584541 NAPGQ99747 312 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms