RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 SYNPOQ8N3V7 929 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 RNF10Q8N5U6 811 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF513Q8N8E2 541 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ANKRD20A12PQ8NF67 263 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ST13P5Q8NFI4 369 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 OR5B17Q8NGF7 314 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CD101Q93033 1021 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TADA1Q96BN2 335 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SMARCD1Q96GM5 515 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TMEM176AQ96HP8 235 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SCLYQ96I15 445 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 HPDLQ96IR7 371 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 NT5C1BQ96P26 610 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 UBL7Q96S82 380 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 MCMBPQ9BTE3 642 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 KLHL25Q9H0H3 589 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 BLZF1Q9H2G9 400 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SEMA6CQ9H3T2 930 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SOX17Q9H6I2 414 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 PIDD1Q9HB75 910 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 KRT82Q9NSB4 513 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 DNMT3BQ9UBC3 853 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ZNF212Q9UDV6 495 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TUBGCP4Q9UGJ1 667 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 NUB1Q9Y5A7 615 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 MTMR11A4FU01 709 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 DRGXA6NNA5 263 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CCDC169A6NNP5 214 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 KCNU1A8MYU2 1149 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 INO80B-WBP1J3KQ70 363 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 HOXC11O43248 304 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 WIPF1O43516 503 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 GYPCP04921 128 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 KRT18P05783 430 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TMEM253P0C7T8 217 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TRIM21P19474 475 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 MMP8P22894 467 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 DNAJB1P25685 340 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 IFNAR2P48551 515 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CSNK1DP48730 415 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SOX10P56693 466 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 NOMO3P69849 1222 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CYP4F3Q08477 520 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 BST2Q10589 180 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TUBB2AQ13885 445 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 FRG1Q14331 258 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 EXOC3L4Q17RC7 722 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 C9orf50Q5SZB4 431 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 IQCEQ6IPM2 695 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 PKN3Q6P5Z2 889 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ABHD17CQ6PCB6 329 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 WDR59Q6PJI9 974 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 HTR3DQ70Z44 454 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CHST9Q7L1S5 443 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TMEM150AQ86TG1 271 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 LRRC49Q8IUZ0 686 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CMIPQ8IY22 773 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 C19orf47Q8N9M1 422 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 C2CD4AQ8NCU7 369 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 RNF214Q8ND24 703 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SLCO2A1Q92959 643 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CPB2Q96IY4 423 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ZBTB45Q96K62 511 aaPredicted RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 SENP8Q96LD8 212 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 NLRP4Q96MN2 994 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TBCBQ99426 244 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 PRMT1Q99873 361 aaKnown RBP3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TUBB2BQ9BVA1 445 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 FAM129AQ9BZQ8 928 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 OSGEPQ9NPF4 335 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CRTAC1Q9NQ79 661 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 GFOD1Q9NXC2 390 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 MTMR10Q9NXD2 777 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 CLEC1BQ9P126 229 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 UVRAGQ9P2Y5 699 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 FBXL21Q9UKT6 434 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 ARHGAP26Q9UNA1 814 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 FAN1Q9Y2M0 1017 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 PCDHA9Q9Y5H5 950 aa3.18□□□□□ -1.9
CCDC178-213ENST00000583930 TSPAN11A1L157 253 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 H0Y8X5 98 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 RGS13O14921 159 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 MDM4O15151 490 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 EXOC3O60645 756 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 PEX14O75381 377 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 GLP2RO95838 553 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 S100BP04271 92 aaPredicted RBP3.17□□□□□ -1.9
CCDC178-213ENST00000583930 CALB1P05937 261 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 JMJD7P0C870 316 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 SRGAP2CP0DJJ0 459 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 CD247P20963 164 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 MLH1P40692 756 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 ECI1P42126 302 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 CLCNKBP51801 687 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 DLG4P78352 724 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 FMO1Q01740 532 aa3.17□□□□□ -1.9
CCDC178-213ENST00000583930 KRT17Q04695 432 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms