RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 PTPN20Q4JDL3 420 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 PMS2CLQ68D20 193 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 ANO7Q6IWH7 933 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 ARCQ7LC44 396 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 APTXQ7Z2E3 356 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 ERMP1Q7Z2K6 904 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 TAC4Q86UU9 113 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 CHPFQ8IZ52 775 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 FIBINQ8TAL6 211 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 IPO4Q8TEX9 1081 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 NT5C3BQ969T7 300 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 PGAP3Q96FM1 320 aaPredicted RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 LSM14BQ9BX40 385 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 NAT10Q9H0A0 1025 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 VPS16Q9H269 839 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 HSD3B7Q9H2F3 369 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 SEMA4GQ9NTN9 838 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 TAB2Q9NYJ8 693 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 PCNX2A6NKB5 2137 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 ADAMTS9Q9P2N4 1935 aa10.27□□□□□ -0.76
SKA2-208ENST00000583927 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 TYW5A2RUC4 315 aaKnown RBP10.27□□□□□ -0.77
SKA2-208ENST00000583927 LGALS16A8MUM7 142 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 KCNU1A8MYU2 1149 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 ZNF217O75362 1048 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 APOEP02649 317 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 PNMA6AP0CW24 399 aaPredicted RBP10.27□□□□□ -0.77
SKA2-208ENST00000583927 GABRG2P18507 467 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 SLC6A4P31645 630 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 GBP1P32455 592 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 NOS2P35228 1153 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 DPP6P42658 865 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 CDK17Q00537 523 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 FOXK2Q01167 660 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 SPEM2Q0P670 501 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 PUM1Q14671 1186 aaKnown RBP eCLIP10.27□□□□□ -0.77
SKA2-208ENST00000583927 LPAL2Q16609 132 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 MAP7D1Q3KQU3 841 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 DCAF6Q58WW2 860 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 MS4A13Q5J8X5 152 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 ACBD5Q5T8D3 534 aaPredicted RBP10.27□□□□□ -0.77
SKA2-208ENST00000583927 TMEM215Q68D42 235 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 NADSYN1Q6IA69 706 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 PRR23CQ6ZRP0 262 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 FAM183BPQ6ZVS7 135 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 AHI1Q8N157 1196 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 KDM1BQ8NB78 822 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 HJURPQ8NCD3 748 aaPredicted RBP10.27□□□□□ -0.77
SKA2-208ENST00000583927 BHMTQ93088 406 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 LMLNQ96KR4 655 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 SPACA7Q96KW9 195 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 ACOX2Q99424 681 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 TPSD1Q9BZJ3 242 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 CLEC4EQ9ULY5 219 aa10.27□□□□□ -0.77
SKA2-208ENST00000583927 TP53BP1Q12888 1972 aaPredicted RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 SPTBN2O15020 2390 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 BCLAF3A2AJT9 711 aaKnown RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 ZBTB24O43167 697 aaPredicted RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 DAB1O75553 588 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 ERBB2P04626 1255 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 CCR1P32246 355 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 HOXD12P35452 270 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 SOX5P35711 763 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 MATKP42679 507 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 IL12RB1P42701 662 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 LIMK1P53667 647 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 NOMO3P69849 1222 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 SLC12A1Q13621 1099 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 STARD3Q14849 445 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 TAF5Q15542 800 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 SLC36A4Q6YBV0 504 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 ADIPOR2Q86V24 386 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 PASD1Q8IV76 773 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 DEFB106AQ8N104 65 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 ATP6V0D2Q8N8Y2 350 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 MSANTD4Q8NCY6 345 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 NETO1Q8TDF5 533 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 HMGB4Q8WW32 186 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 TTC17Q96AE7 1141 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 RMDN1Q96DB5 314 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 C18orf8Q96DM3 657 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 PRICKLE1Q96MT3 831 aaPredicted RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 PRMT1Q99873 361 aaKnown RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 TMEM245Q9H330 911 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 FBRSQ9HAH7 460 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 ZDHHC4Q9NPG8 344 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 VPS45Q9NRW7 570 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 CACNA2D2Q9NY47 1150 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms