RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ANO7Q6IWH7 933 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 SLC26A9Q7LBE3 791 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 ALLCQ8N6M5 410 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 ZNF397Q8NF99 534 aaPredicted RBP25.88■■□□□ 1.73
TSEN54-209ENST00000583454 DQX1Q8TE96 717 aaKnown RBP25.88■■□□□ 1.73
TSEN54-209ENST00000583454 SLC2A13Q96QE2 648 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 SYT11Q9BT88 431 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 VPS45Q9NRW7 570 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 INVSQ9Y283 1065 aa25.88■■□□□ 1.73
TSEN54-209ENST00000583454 BCLAF3A2AJT9 711 aaKnown RBP25.87■■□□□ 1.73
TSEN54-209ENST00000583454 CBFA2T2O43439 604 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 HSF2BPO75031 334 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 BCKDHBP21953 392 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 ELF2Q15723 593 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 STPG1Q5TH74 334 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 EMC10Q5UCC4 262 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 SFMBT2Q5VUG0 894 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 PMS2CLQ68D20 193 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 TOGARAM2Q6ZUX3 1019 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 XYLT1Q86Y38 959 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 OLIG1Q8TAK6 271 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 ITIH6Q6UXX5 1313 aa25.87■■□□□ 1.73
TSEN54-209ENST00000583454 SGK1O00141 431 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 MSI1O43347 362 aaKnown RBP25.86■■□□□ 1.73
TSEN54-209ENST00000583454 RHOBTB1O94844 696 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 IGLV3-27P01718 113 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 MMP8P22894 467 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 CORO1AP31146 461 aaKnown RBP25.86■■□□□ 1.73
TSEN54-209ENST00000583454 SCNN1AP37088 669 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 PRKCIP41743 596 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 KDSRQ06136 332 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 NNTQ13423 1086 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 CLEC16AQ2KHT3 1053 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 E4F1Q66K89 784 aaPredicted RBP25.86■■□□□ 1.73
TSEN54-209ENST00000583454 TXNDC5Q8NBS9 432 aaKnown RBP25.86■■□□□ 1.73
TSEN54-209ENST00000583454 MSANTD4Q8NCY6 345 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 ARHGEF4Q9NR80 690 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 SPHK2Q9NRA0 654 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 CAPN11Q9UMQ6 739 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 CEP192Q8TEP8 1941 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 GON4LQ3T8J9 2241 aa25.86■■□□□ 1.73
TSEN54-209ENST00000583454 CAPN9O14815 690 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 HOXC11O43248 304 aaPredicted RBP25.85■■□□□ 1.73
TSEN54-209ENST00000583454 ADAM23O75077 832 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 APODP05090 189 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 TIE1P35590 1138 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 GRIA2P42262 883 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 RING1Q06587 406 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 ASIC2Q16515 512 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 TMEM25Q86YD3 366 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 NUCKS1Q9H1E3 243 aaKnown RBP25.85■■□□□ 1.73
TSEN54-209ENST00000583454 ZDHHC4Q9NPG8 344 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 AGO1Q9UL18 857 aaKnown RBP25.85■■□□□ 1.73
TSEN54-209ENST00000583454 HCN2Q9UL51 889 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 PI4KAP42356 2102 aa25.85■■□□□ 1.73
TSEN54-209ENST00000583454 KLF8O95600 359 aaPredicted RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 IGLV3-25P01717 112 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 HARS2P49590 506 aaKnown RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 CREB5Q02930 508 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 CENPCQ03188 943 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 EIF4EBP2Q13542 120 aaPredicted RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 HSF5Q4G112 596 aaPredicted RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 USP39Q53GS9 565 aaKnown RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 IL31Q6EBC2 164 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 TAC4Q86UU9 113 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 DENND1CQ8IV53 801 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 FAM217AQ8IXS0 508 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 DEFB106AQ8N104 65 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 SLC30A5Q8TAD4 765 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 SYN2Q92777 582 aaPredicted RBP25.84■■□□□ 1.73
TSEN54-209ENST00000583454 SERPINB11Q96P15 392 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 MARK1Q9P0L2 795 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 STOML2Q9UJZ1 356 aa25.84■■□□□ 1.73
TSEN54-209ENST00000583454 GRAP2O75791 330 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 LATS1O95835 1130 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 GBP1P32455 592 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 TNFRSF4P43489 277 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 TBX4P57082 545 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 ZBED6P86452 979 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 GAD2Q05329 585 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 PTP4A2Q12974 167 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 C2CD6Q53TS8 623 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 DCAF6Q58WW2 860 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 MMS22LQ6ZRQ5 1243 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 PHF13Q86YI8 300 aaPredicted RBP25.83■■□□□ 1.73
TSEN54-209ENST00000583454 SLC39A13Q96H72 371 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 TLR6Q9Y2C9 796 aa25.83■■□□□ 1.73
TSEN54-209ENST00000583454 FAM170AA1A519 330 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.82■■□□□ 1.72
TSEN54-209ENST00000583454 TRIM24O15164 1050 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 TULP3O75386 442 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 DAB1O75553 588 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 TRUB2O95900 331 aaKnown RBP25.82■■□□□ 1.72
TSEN54-209ENST00000583454 GYPCP04921 128 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 CHKAP35790 457 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 NUGGCQ68CJ6 796 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 SARM1Q6SZW1 724 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 C11orf74Q86VG3 221 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 UNC45BQ8IWX7 931 aa25.82■■□□□ 1.72
TSEN54-209ENST00000583454 CPXM2Q8N436 756 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms