RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 KRTAP10-11P60412 298 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 CYP4F2P78329 520 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 RAE1P78406 368 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 CCDC15Q0P6D6 951 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 AARS2Q5JTZ9 985 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 SLC29A4Q7RTT9 530 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 HERC6Q8IVU3 1022 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 OR4N4Q8N0Y3 316 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 C12orf76Q8N812 135 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 THAP4Q8WY91 577 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 MMS19Q96T76 1030 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 TFCP2L1Q9NZI6 479 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 NDUFAF4Q9P032 175 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 RAB21Q9UL25 225 aa5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 UBE2J1Q9Y385 318 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-205ENST00000581383 GXYLT2A0PJZ3 443 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 SLC38A8A6NNN8 435 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ZNF213O14771 459 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 IKBKBO14920 756 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 BMP15O95972 392 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 KELP23276 732 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 FAM3BP58499 235 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ACTR2P61160 394 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 PDCLQ13371 301 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 CBFBQ13951 182 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 AAK1Q2M2I8 961 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ALFQ53S48 1182 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 CEP85Q6P2H3 762 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ACSM6Q6P461 480 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 SYT13Q7L8C5 426 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 BHLHA9Q7RTU4 235 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 PAF1Q8N7H5 531 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 DPF1Q92782 380 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 SDCCAG3Q96C92 435 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 EDC3Q96F86 508 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 FAR2Q96K12 515 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 SNX18Q96RF0 628 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 PYM1Q9BRP8 204 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 CHODLQ9H9P2 273 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 RIC8AQ9NPQ8 531 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 RXFP3Q9NSD7 469 aa5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 ZNF70Q9UC06 446 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 TRPC5Q9UL62 973 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 LRRFIP2Q9Y608 721 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-205ENST00000581383 LINC01548A6NM66 108 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 NCAM2O15394 837 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 AGR2O95994 175 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 MBPP02686 304 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TK1P04183 234 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 CYP21A2P08686 494 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 PRR35P0CG20 571 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 CNTFP26441 200 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 CDK7P50613 346 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 PAPOLAP51003 745 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 JAK3P52333 1124 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 RBM5P52756 815 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 RPL15P61313 204 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 RBM6P78332 1123 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 FAM187BQ17R55 369 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 LVRNQ6Q4G3 990 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TMEM57Q8N5G2 664 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TERB1Q8NA31 727 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 SEMA6DQ8NFY4 1073 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 MAFAQ8NHW3 353 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 HS6ST2Q96MM7 605 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 COG8Q96MW5 612 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 EIF2AK1Q9BQI3 630 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TWSG1Q9GZX9 223 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 KCNK9Q9NPC2 374 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 ABHD10Q9NUJ1 306 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 BAG5Q9UL15 447 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 SLC12A4Q9UP95 1085 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 PCDHA10Q9Y5I2 948 aa5.29□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3DA0A087WVF3 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3IA0A087WXS9 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3EA0A087X179 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3KA0A087X1G2 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3BA6NDS4 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3FA6NER0 549 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 AGAP5A6NIR3 686 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 CGB1A6NKQ9 187 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TARM1B6A8C7 271 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3LB9A6J9 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 FYB1O15117 783 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 NKX2-8O15522 239 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 JTBO76095 146 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 POLBP06746 335 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 TBC1D3HP0C7X1 549 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 CYP2D6P10635 497 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 APEHP13798 732 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 MPGP29372 298 aa5.28□□□□□ -1.56
SMCHD1-205ENST00000581383 PLCD1P51178 756 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms