RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 OLIG1Q8TAK6 271 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 ATRIPQ8WXE1 791 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 RNF34Q969K3 372 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 XPO4Q9C0E2 1151 aaKnown RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 NUCKS1Q9H1E3 243 aaKnown RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 POLR3BQ9NW08 1133 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 COX16Q9P0S2 106 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 CALCOCO1Q9P1Z2 691 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 XPO7Q9UIA9 1087 aaKnown RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 PRRT4C9JH25 899 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 LILRB5O75023 590 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 CALB1P05937 261 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 ABCB4P21439 1286 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 TNFAIP3P21580 790 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 FLT3P36888 993 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 SGSHP51688 502 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 C1QBPQ07021 282 aaKnown RBP23.96■■□□□ 1.43
LIMD2-204ENST00000578297 NME3Q13232 169 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 MS4A13Q5J8X5 152 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 TRMT11Q7Z4G4 463 aaKnown RBP23.96■■□□□ 1.43
LIMD2-204ENST00000578297 ALLCQ8N6M5 410 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 ZNF513Q8N8E2 541 aaPredicted RBP23.96■■□□□ 1.43
LIMD2-204ENST00000578297 RNF214Q8ND24 703 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 ADAM33Q9BZ11 813 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 SEMA4AQ9H3S1 761 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 HAUS4Q9H6D7 363 aa23.96■■□□□ 1.43
LIMD2-204ENST00000578297 ITIH6Q6UXX5 1313 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 TBL1XO60907 577 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 KLF8O95600 359 aaPredicted RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 F9P00740 461 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 TFE3P19532 575 aaPredicted RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 SULT1E1P49888 294 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 DMWDQ09019 674 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 ACAD10Q6JQN1 1059 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 TRNP1Q6NT89 227 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 MON1BQ7L1V2 547 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 CCDC33Q8N5R6 958 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 TXNDC5Q8NBS9 432 aaKnown RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 HJURPQ8NCD3 748 aaPredicted RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 PRICKLE1Q96MT3 831 aaPredicted RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 TBCBQ99426 244 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 METTL5Q9NRN9 209 aaKnown RBP23.95■■□□□ 1.42
LIMD2-204ENST00000578297 PIGVQ9NUD9 493 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 HCN2Q9UL51 889 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 CAPN11Q9UMQ6 739 aa23.95■■□□□ 1.42
LIMD2-204ENST00000578297 CCDC163A0A0D9SF12 145 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 CBFA2T2O43439 604 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 TACR2P21452 398 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 HOXC13P31276 330 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 CXCR3P49682 368 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 ZBED6P86452 979 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 KLHL30Q0D2K2 578 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 CRY1Q16526 586 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 GEN1Q17RS7 908 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 EOGTQ5NDL2 527 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 PPP1R2P3Q6NXS1 205 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 ZNF571Q7Z3V5 609 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-204ENST00000578297 BNIPLQ7Z465 357 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 ANKS1BQ7Z6G8 1248 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 LONP2Q86WA8 852 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 SYN2Q92777 582 aaPredicted RBP23.94■■□□□ 1.42
LIMD2-204ENST00000578297 MYEOVQ96EZ4 313 aa23.94■■□□□ 1.42
LIMD2-204ENST00000578297 MYO18AQ92614 2054 aaKnown RBP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 TYW5A2RUC4 315 aaKnown RBP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 SGK1O00141 431 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 HNRNPLP14866 589 aaKnown RBP eCLIP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 FNTBP49356 437 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 DEUP1Q05D60 604 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 BRMS1LQ5PSV4 323 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 EGFLAMQ63HQ2 1017 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 RAP1GAP2Q684P5 730 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 SND1Q7KZF4 910 aaKnown RBP eCLIP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 PHLDB2Q86SQ0 1253 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 WDR5BQ86VZ2 330 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 CHSY1Q86X52 802 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 ZNF557Q8N988 423 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 C3orf20Q8ND61 904 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 NKD2Q969F2 451 aaPredicted RBP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 CFAP57Q96MR6 1250 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 HHIPQ96QV1 700 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 PRMT1Q99873 361 aaKnown RBP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 WDCPQ9H6R7 721 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 ZDHHC4Q9NPG8 344 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 ARHGEF38Q9NXL2 777 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 PAXBP1Q9Y5B6 917 aa23.93■■□□□ 1.42
LIMD2-204ENST00000578297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.93■■□□□ 1.42
LIMD2-204ENST00000578297 ADAM23O75077 832 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 APBB3O95704 486 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 GYPCP04921 128 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 KRT3P12035 628 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 HLA-FP30511 346 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 NTSR1P30989 418 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 DGKEP52429 567 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 RPS24P62847 133 aaKnown RBP23.92■■□□□ 1.42
LIMD2-204ENST00000578297 EIF4HQ15056 248 aaKnown RBP23.92■■□□□ 1.42
LIMD2-204ENST00000578297 HEATR6Q6AI08 1181 aaKnown RBP23.92■■□□□ 1.42
LIMD2-204ENST00000578297 KIAA0907Q7Z7F0 614 aaPredicted RBP23.92■■□□□ 1.42
LIMD2-204ENST00000578297 MCOLN2Q8IZK6 566 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 LGI2Q8N0V4 545 aa23.92■■□□□ 1.42
LIMD2-204ENST00000578297 EMC1Q8N766 993 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms