RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C10orf142B7Z368 130 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TK2O00142 265 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 SEMA4FO95754 770 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 IGLV3-27P01718 113 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 DNTTP04053 509 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PAEPP09466 180 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 DLDP09622 509 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TKTL1P51854 596 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 DPYDQ12882 1025 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 MTA1Q13330 715 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ADAM9Q13443 819 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 MEA1Q16626 185 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 SGO2Q562F6 1265 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TMPRSS12Q86WS5 348 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TTC17Q96AE7 1141 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 FZD4Q9ULV1 537 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
SMARCE1-214ENST00000578112 TYW5A2RUC4 315 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 CETN3O15182 167 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 VILLO15195 856 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 FBXO21O94952 628 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 SRPRAP08240 638 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 PABPC1P11940 636 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 PPP1R2P41236 205 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 CTSKP43235 329 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 CCR5P51681 352 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 RPS14P62263 151 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 SMAD1Q15797 465 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 KIAA0895LQ68EN5 471 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 CHST9Q7L1S5 443 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 SLCO6A1Q86UG4 719 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 FMNL3Q8IVF7 1028 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 SETD7Q8WTS6 366 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 TMA16Q96EY4 203 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 CIPCQ9C0C6 399 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 RSPH9Q9H1X1 276 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 TMEM51Q9NW97 253 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
SMARCE1-214ENST00000578112 A0A087WV48 116 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 SART1O43290 800 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 CD58P19256 250 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 SYKP43405 635 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 SLC11A2P49281 568 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 KRT85P78386 507 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 ILKQ13418 452 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 BHLHA9Q7RTU4 235 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 HJURPQ8NCD3 748 aaPredicted RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 RHBDD1Q8TEB9 315 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 SLC6A17Q9H1V8 727 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 PABPC3Q9H361 631 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 TM9SF3Q9HD45 589 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 PLK2Q9NYY3 685 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 EIF2B4Q9UI10 523 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.54
SMARCE1-214ENST00000578112 WASH3PC4AMC7 463 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 RNASEH1O60930 286 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 OXCT1P55809 520 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 UBR7Q8N806 425 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 JAKMIP2Q96AA8 810 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 HSFY1Q96LI6 401 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 CAMK1GQ96NX5 476 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 TSG101Q99816 390 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 ULBP1Q9BZM6 244 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 MIR1-1HGQ9H1L0 117 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 ANKRD6Q9Y2G4 727 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 MAGEC1O60732 1142 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 POLR2EP19388 210 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 ST8SIA6P61647 398 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 CUL2Q13617 745 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 TMEM215Q68D42 235 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 MBLAC2Q68D91 279 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 ADIPOR2Q86V24 386 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 CCDC117Q8IWD4 279 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 SIX6OS1Q8N1H7 587 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 FIBINQ8TAL6 211 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 ERVMER34-1Q9H9K5 563 aa11.7□□□□□ -0.54
SMARCE1-214ENST00000578112 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms