RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 DDX1Q92499 740 aaKnown RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 AZIN2Q96A70 460 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 BTN2A3PQ96KV6 586 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 SPACA7Q96KW9 195 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMG6-220ENST00000576218 RRN3Q9NYV6 651 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 STOML2Q9UJZ1 356 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 NOCTQ9UK39 431 aaKnown RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 SLC27A6Q9Y2P4 619 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 PAXBP1Q9Y5B6 917 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 TEX33O43247 280 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 HRO43593 1189 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 SLC6A4P31645 630 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 NOS2P35228 1153 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 MATKP42679 507 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 PITX1P78337 314 aaPredicted RBP15.82■□□□□ 0.12
SMG6-220ENST00000576218 IQCB1Q15051 598 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 EIF4HQ15056 248 aaKnown RBP15.82■□□□□ 0.12
SMG6-220ENST00000576218 ELF2Q15723 593 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 GEN1Q17RS7 908 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 C2CD6Q53TS8 623 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 RABGAP1LQ5R372 815 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 PIK3R6Q5UE93 754 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 LAIR1Q6GTX8 287 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 MMS22LQ6ZRQ5 1243 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 APTXQ7Z2E3 356 aaKnown RBP15.82■□□□□ 0.12
SMG6-220ENST00000576218 XYLT1Q86Y38 959 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 SUMF1Q8NBK3 374 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 WFIKKN2Q8TEU8 576 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 C11orf70Q9BRQ4 267 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 IRX2Q9BZI1 471 aaPredicted RBP15.82■□□□□ 0.12
SMG6-220ENST00000576218 NUCKS1Q9H1E3 243 aaKnown RBP15.82■□□□□ 0.12
SMG6-220ENST00000576218 ABCB8Q9NUT2 735 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 CACNA2D2Q9NY47 1150 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 STARD13Q9Y3M8 1113 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 FANCMQ8IYD8 2048 aa15.82■□□□□ 0.12
SMG6-220ENST00000576218 H0Y626 953 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 NPC1O15118 1278 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 SYNCRIPO60506 623 aaKnown RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 PABPC1P11940 636 aaKnown RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 TACR2P21452 398 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 SCNN1AP37088 669 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 SGSHP51688 502 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 FMO1Q01740 532 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 DEUP1Q05D60 604 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 MTA1Q13330 715 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 FNDC3BQ53EP0 1204 aaKnown RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 FAM133BQ5BKY9 247 aaKnown RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 MPP7Q5T2T1 576 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 NADSYN1Q6IA69 706 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 TMEM92Q6UXU6 159 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 CHST9Q7L1S5 443 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 AHI1Q8N157 1196 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 MDGA1Q8NFP4 955 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 SLC30A5Q8TAD4 765 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 SLC39A13Q96H72 371 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 METTL5Q9NRN9 209 aaKnown RBP15.81■□□□□ 0.12
SMG6-220ENST00000576218 GGA2Q9UJY4 613 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 FBXO10Q9UK96 956 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 CLEC4EQ9ULY5 219 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 USP18Q9UMW8 372 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 PLA2G4CQ9UP65 541 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 INVSQ9Y283 1065 aa15.81■□□□□ 0.12
SMG6-220ENST00000576218 A0A1B0GTH6 734 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 ANKRD62A6NC57 917 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 KCNU1A8MYU2 1149 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 MAP3K13O43283 966 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 TIMM44O43615 452 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 ADAM23O75077 832 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 MOCS3O95396 460 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 CALB1P05937 261 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 TPM3P06753 285 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 GABRB2P47870 512 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 RPS24P62847 133 aaKnown RBP15.8■□□□□ 0.12
SMG6-220ENST00000576218 BYSLQ13895 437 aaKnown RBP15.8■□□□□ 0.12
SMG6-220ENST00000576218 ASIC2Q16515 512 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 MS4A13Q5J8X5 152 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 SERPINA13PQ6UXR4 307 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 C11orf74Q86VG3 221 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 KIAA2013Q8IYS2 634 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 CFAP52Q8N1V2 620 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 ACOX2Q99424 681 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 AGPAT1Q99943 283 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 WDCPQ9H6R7 721 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 ELOVL2Q9NXB9 296 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 ADAM22Q9P0K1 906 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 XPO7Q9UIA9 1087 aaKnown RBP15.8■□□□□ 0.12
SMG6-220ENST00000576218 RAD54BQ9Y620 910 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 STON1Q9Y6Q2 735 aa15.8■□□□□ 0.12
SMG6-220ENST00000576218 A0A1W2PQC6 194 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 LRRC53A6NM62 1247 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 GFRA2O00451 464 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 RHOBTB1O94844 696 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 F9P00740 461 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 IGLV3-25P01717 112 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms