RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PROSCO94903 275 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 SLC6A4P31645 630 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 GJA4P35212 333 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 ADRA1BP35368 520 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 AIF1P55008 147 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 SIGLEC14Q08ET2 396 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 MLF2Q15773 248 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-217ENST00000575711 MPPE1Q53F39 396 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 MS4A13Q5J8X5 152 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 C1orf228Q6PIY5 440 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 SLFN11Q7Z7L1 901 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 RALGPS2Q86X27 583 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-217ENST00000575711 DDI1Q8WTU0 396 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 NTAN1Q96AB6 310 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 TMA16Q96EY4 203 aaKnown RBP14.48□□□□□ -0.09
RPAIN-217ENST00000575711 HAPLN3Q96S86 360 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 BBS2Q9BXC9 721 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 COL25A1Q9BXS0 654 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-217ENST00000575711 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-217ENST00000575711 ANLNQ9NQW6 1124 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 MARK1Q9P0L2 795 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 TFR2Q9UP52 801 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 HS3ST4Q9Y661 456 aa14.48□□□□□ -0.09
RPAIN-217ENST00000575711 VCANP13611 3396 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 RCCD1A6NED2 376 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TMEM110-MUSTN1A8MSY1 372 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 NEDD8-MDP1E9PL57 170 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 SPECC1L-ADORA2AF8WAN1 911 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TNFRSF10AO00220 468 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PJA2O43164 708 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TSPAN3O60637 253 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 LRCH4O75427 683 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TYRP14679 529 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TACR2P21452 398 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 MIPP30301 263 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 CTHP32929 405 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 MAN1A1P33908 653 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PCK1P35558 622 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 ARHGAP25P42331 645 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 SOX9P48436 509 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PRKCQQ04759 706 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 KIF5AQ12840 1032 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 AUHQ13825 339 aaKnown RBP14.47□□□□□ -0.09
RPAIN-217ENST00000575711 MESDQ14696 234 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 EFHC2Q5JST6 749 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PIK3R6Q5UE93 754 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 RFWD3Q6PCD5 774 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TPRG1Q6ZUI0 275 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 LGI2Q8N0V4 545 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 SIX5Q8N196 739 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 CCDC185Q8N715 623 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 BHMTQ93088 406 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 EXOC4Q96A65 974 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 SHDQ96IW2 340 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 CALR3Q96L12 384 aaKnown RBP14.47□□□□□ -0.09
RPAIN-217ENST00000575711 C1orf74Q96LT6 269 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 XPO6Q96QU8 1125 aaKnown RBP14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PRMT1Q99873 361 aaKnown RBP14.47□□□□□ -0.09
RPAIN-217ENST00000575711 SIK2Q9H0K1 926 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 TMPRSS4Q9NRS4 437 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 PCSK1NQ9UHG2 260 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 ADGRG1Q9Y653 693 aa14.47□□□□□ -0.09
RPAIN-217ENST00000575711 MYO10Q9HD67 2058 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 BTNL10A8MVZ5 291 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 PI4K2BG5E9Z4 385 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 I6L893 689 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 GFRA2O00451 464 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 MAN2B1O00754 1011 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 PENKP01210 267 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 CCDC175P0C221 793 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 SSR1P43307 286 aaKnown RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 HADHBP55084 474 aaKnown RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 SCAPQ12770 1279 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 RABGAP1LQ5R372 815 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 MPP7Q5T2T1 576 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 IER5LQ5T953 404 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 TTC39BQ5VTQ0 682 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 FYB2Q5VWT5 728 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 LRRC31Q6UY01 552 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 ARFGAP1Q8N6T3 406 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 HJURPQ8NCD3 748 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 PRICKLE1Q96MT3 831 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 RPRD1AQ96P16 312 aaPredicted RBP14.46□□□□□ -0.09
RPAIN-217ENST00000575711 PPP1R9BQ96SB3 815 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 LACRTQ9GZZ8 138 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 OSBPL2Q9H1P3 480 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 VANGL2Q9ULK5 521 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 FZD10Q9ULW2 581 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
RPAIN-217ENST00000575711 KRBA1A5PL33 1030 aa14.45□□□□□ -0.1
RPAIN-217ENST00000575711 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.45□□□□□ -0.1
RPAIN-217ENST00000575711 TBL1XO60907 577 aa14.45□□□□□ -0.1
RPAIN-217ENST00000575711 GGCXP38435 758 aa14.45□□□□□ -0.1
RPAIN-217ENST00000575711 EIF2DP41214 584 aaKnown RBP14.45□□□□□ -0.1
RPAIN-217ENST00000575711 IFI16Q16666 785 aaKnown RBP14.45□□□□□ -0.1
RPAIN-217ENST00000575711 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
RPAIN-217ENST00000575711 GAB4Q2WGN9 574 aa14.45□□□□□ -0.1
RPAIN-217ENST00000575711 ERMARDQ5T6L9 678 aa14.45□□□□□ -0.1
RPAIN-217ENST00000575711 DAB2IPQ5VWQ8 1189 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms