RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 HOXA4Q00056 320 aaPredicted RBP5.51□□□□□ -1.53
CDC27-215ENST00000573550 FOXF2Q12947 444 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 DCTN1Q14203 1278 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 MTHFSDQ2M296 383 aaKnown RBP5.51□□□□□ -1.53
CDC27-215ENST00000573550 ZSCAN23Q3MJ62 389 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TMEM119Q4V9L6 283 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 MANEALQ5VSG8 457 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TRIM72Q6ZMU5 477 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 ZNF782Q6ZMW2 699 aaPredicted RBP5.51□□□□□ -1.53
CDC27-215ENST00000573550 MCM10Q7L590 875 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 RAB11FIP4Q86YS3 637 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 SIRT6Q8N6T7 355 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TERB1Q8NA31 727 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 FAM184AQ8NB25 1140 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 ATP11CQ8NB49 1132 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 ZC3H10Q96K80 434 aaKnown RBP5.51□□□□□ -1.53
CDC27-215ENST00000573550 SNX18Q96RF0 628 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TBCBQ99426 244 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TRIM36Q9NQ86 728 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 AMFRQ9UKV5 643 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 LAMB4A4D0S4 1761 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 RFX7Q2KHR2 1363 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TTC41PQ6P2S7 1318 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 FNDC1Q4ZHG4 1894 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 A0A1W2PPC4 97 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 ANO9A1A5B4 782 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 TISP43B9A030 160 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 THAP12O43422 761 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 PRC1O43663 620 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 ZNF500O60304 480 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 LATS1O95835 1130 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 FGAP02671 866 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 MYCLP12524 364 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 CHMLP26374 656 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 NTSR1P30989 418 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 HOXC9P31274 260 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 TM4SF4P48230 202 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 IFIT5Q13325 482 aaKnown RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 TAF7Q15545 349 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 RRAGBQ5VZM2 374 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 MZT2AQ6P582 158 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 KSR2Q6VAB6 950 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 PTCHD4Q6ZW05 846 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 USP49Q70CQ1 688 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 KRT28Q7Z3Y7 464 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 TICAM2Q86XR7 235 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 SFTPA1Q8IWL2 248 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 CCDC33Q8N5R6 958 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 METTL25Q8N6Q8 603 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 KIF1BPQ96EK5 621 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 DAZAP1Q96EP5 407 aaKnown RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 ZDHHC12Q96GR4 267 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 MMS19Q96T76 1030 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 COLEC11Q9BWP8 271 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 CIPCQ9C0C6 399 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 HEYLQ9NQ87 328 aaPredicted RBP5.5□□□□□ -1.53
CDC27-215ENST00000573550 ASIC5Q9NY37 505 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 HPSEQ9Y251 543 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 COL15A1P39059 1388 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 HEG1Q9ULI3 1381 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 ALS2Q96Q42 1657 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 SCN11AQ9UI33 1791 aa5.5□□□□□ -1.53
CDC27-215ENST00000573550 CCDC171Q6TFL3 1326 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 PKD1L3Q7Z443 1732 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 SMIM22K7EJ46 135 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 EXOC5O00471 708 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 CES2O00748 559 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 EXOC3O60645 756 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 CAND2O75155 1236 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 UBTFL1P0CB47 393 aaPredicted RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 FGFR2P21802 821 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 HSPA4P34932 840 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 STT3AP46977 705 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 AMPHP49418 695 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 DIO1P49895 249 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 RENBPP51606 427 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 SLC10A2Q12908 348 aaPredicted RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 KRT24Q2M2I5 525 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 PRAMEF17Q5VTA0 474 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 ZNF66Q6ZN08 573 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 BCDIN3DQ7Z5W3 292 aaKnown RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 CHSY1Q86X52 802 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 ERC1Q8IUD2 1116 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 UBE2Q2Q8WVN8 375 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 FAM227BQ96M60 508 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 HIST1H2AAQ96QV6 131 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 MYO1AQ9UBC5 1043 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 NOL7Q9UMY1 257 aaKnown RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 ATP6V1DQ9Y5K8 247 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
CDC27-215ENST00000573550 JCADQ9P266 1359 aa5.49□□□□□ -1.53
CDC27-215ENST00000573550 SPEF2Q9C093 1822 aa5.48□□□□□ -1.53
CDC27-215ENST00000573550 AREL1O15033 823 aa5.48□□□□□ -1.53
CDC27-215ENST00000573550 LETM1O95202 739 aaPredicted RBP5.48□□□□□ -1.53
CDC27-215ENST00000573550 MYL3P08590 195 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms