RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	SUSD3	Q96L08	255 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	TTC25	Q96NG3	672 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	SLC2A13	Q96QE2	648 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	TMEM209	Q96SK2	561 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	HERC2P3	Q9BVR0	1158 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	DHX35	Q9H5Z1	703 aa	Known RBP	10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	IGFLR1	Q9H665	355 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	LRRC4	Q9HBW1	653 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	TMEM30A	Q9NV96	361 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.5	□□□□□ -0.73
TCF4-231	ENST00000566279	PTPRD	P23468	1912 aa		10.5	□□□□□ -0.73
TCF4-231	ENST00000566279		A0A087WUV0	522 aa	Predicted RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	C2orf71	A6NGG8	1288 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	GOLGA8M	H3BSY2	632 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	AP1G2	O75843	785 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	UROD	P06132	367 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CTSA	P10619	480 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FOSL2	P15408	326 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FGFR3	P22607	806 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	STIP1	P31948	543 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	TKTL1	P51854	596 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	SEC24C	P53992	1094 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	YWHAZ	P63104	245 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	STAT4	Q14765	748 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	HIF1A	Q16665	826 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	USP41	Q3LFD5	358 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	TCEAL5	Q5H9L2	206 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	VARS2	Q5ST30	1063 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CENPU	Q71F23	418 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	GPRIN1	Q7Z2K8	1008 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	EXOC3L1	Q86VI1	746 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	ZBED8	Q8IZ13	594 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	TAB3	Q8N5C8	712 aa	Predicted RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	MYCBPAP	Q8TBZ2	947 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	MRPL38	Q96DV4	380 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	RTP4	Q96DX8	246 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	NPY6R	Q99463	290 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	GAS2L1	Q99501	681 aa	Predicted RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	SELENOS	Q9BQE4	189 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	TTPAL	Q9BTX7	342 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	PHACTR1	Q9C0D0	580 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	EURL	Q9NYK6	297 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CWC15	Q9P013	229 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	LGALS13	Q9UHV8	139 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	HEY1	Q9Y5J3	304 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	USP3	Q9Y6I4	520 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279		M0QZQ0	153 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	LINC01565	O15544	149 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	TRAPPC3	O43617	180 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	BANF1	O75531	89 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FYN	P06241	537 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CNP	P09543	421 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	SPATA31D3	P0C874	917 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	ODC1	P11926	461 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	PCSK1	P29120	753 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	NOS2	P35228	1153 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	NRIP1	P48552	1158 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CCT5	P48643	541 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	ARPP19	P56211	112 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	DSG1	Q02413	1049 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	PDIA2	Q13087	525 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	MSS51	Q4VC12	460 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	DCAF6	Q58WW2	860 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	RAB41	Q5JT25	222 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FNBP1L	Q5T0N5	605 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	GPR153	Q6NV75	609 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	SPATA31D4	Q6ZUB0	917 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	HFE2	Q6ZVN8	426 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	NLRP14	Q86W24	1093 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FAM131B	Q86XD5	332 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CCDC13	Q8IYE1	715 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CYP4X1	Q8N118	509 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CENPT	Q96BT3	561 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CSPG4P5	Q96PW8	444 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	KCNK16	Q96T55	309 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	WDR83	Q9BRX9	315 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	ULBP1	Q9BZM6	244 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	MRPL17	Q9NRX2	175 aa	Known RBP	10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	FZD10	Q9ULW2	581 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	LZTS1	Q9Y250	596 aa		10.49	□□□□□ -0.73
TCF4-231	ENST00000566279	CLUH	O75153	1309 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	BCLAF3	A2AJT9	711 aa	Known RBP	10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	CFAP69	A5D8W1	941 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	HHLA1	C9JL84	531 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279		E7ESA3	106 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	SMAP	O00193	183 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	NDUFAB1	O14561	156 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	TEX28	O15482	410 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	FBXO21	O94952	628 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	MAP3K6	O95382	1288 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	CYP11A1	P05108	521 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	CHN1	P15882	459 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	GCA	P28676	217 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	RBL1	P28749	1068 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	RDX	P35241	583 aa	Known RBP	10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	ARL4C	P56559	192 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	DAOA	P59103	153 aa		10.48	□□□□□ -0.73
TCF4-231	ENST00000566279	BASP1	P80723	227 aa	Known RBP	10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms