RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SLC11A2P49281 568 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 KLK7P49862 253 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 ARHGAP8P85298 464 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 PUM1Q14671 1186 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 ADGRF1Q5T601 910 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 TAF3Q5VWG9 929 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 NUGGCQ68CJ6 796 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 UNC45BQ8IWX7 931 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 FAM217AQ8IXS0 508 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 TMEFF1Q8IYR6 380 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 WDTC1Q8N5D0 677 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 KCNV2Q8TDN2 545 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 LOXL4Q96JB6 756 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 SERPINB11Q96P15 392 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 CPXM1Q96SM3 734 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 SYNCQ9H7C4 482 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 CD93Q9NPY3 652 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 ABCB8Q9NUT2 735 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 CALCOCO1Q9P1Z2 691 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 CYP8B1Q9UNU6 501 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC27A6Q9Y2P4 619 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 ATRXP46100 2492 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 PLXND1Q9Y4D7 1925 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 A0A1W2PQF6 199 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 IGLV3-27P01718 113 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 NDUFV2P19404 249 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 P2RY2P41231 377 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 RPL34P49207 117 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 NUMBP49757 651 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 ATXN1P54253 815 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 FKBP15Q5T1M5 1219 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 KLHDC7AQ5VTJ3 777 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 PMS2CLQ68D20 193 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 NADSYN1Q6IA69 706 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 FAM183BPQ6ZVS7 135 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 CYP2U1Q7Z449 544 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 TMEM110Q86TL2 294 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 DEFB106AQ8N104 65 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 CFAP52Q8N1V2 620 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 ZNF366Q8N895 744 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 WFDC5Q8TCV5 224 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 STK32AQ8WU08 396 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 PIGKQ92643 395 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 FCRL2Q96LA5 508 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 PCMTD1Q96MG8 357 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 FAM204AQ9H8W3 233 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 POPDC2Q9HBU9 364 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 RXFP3Q9NSD7 469 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 ELOVL2Q9NXB9 296 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 MBD1Q9UIS9 605 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 GON4LQ3T8J9 2241 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 USP24Q9UPU5 2620 aa14.16□□□□□ -0.14
VPS9D1-204ENST00000565023 LATS1O95835 1130 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 TRUB2O95900 331 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 APOEP02649 317 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 ERBB2P04626 1255 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 ZNF806P0C7X5 589 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 HLA-EP13747 358 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 HLA-FP30511 346 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 RPS24P62847 133 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 YWHAZP63104 245 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 ZNF234Q14588 700 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 STARD3Q14849 445 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 MEA1Q16626 185 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 MAP7D1Q3KQU3 841 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 PTPN20Q4JDL3 420 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 FAM133BQ5BKY9 247 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 ZC3H12AQ5D1E8 599 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 PIK3R6Q5UE93 754 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 TMEM215Q68D42 235 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 LPCAT2Q7L5N7 544 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 LUZP1Q86V48 1076 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 C11orf74Q86VG3 221 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 CHSY1Q86X52 802 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 MFN1Q8IWA4 741 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 RNF34Q969K3 372 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 MYEOVQ96EZ4 313 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 NOX5Q96PH1 765 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 GABRG3Q99928 467 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 NAA15Q9BXJ9 866 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC2A11Q9BYW1 496 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 NUCKS1Q9H1E3 243 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 DLL3Q9NYJ7 618 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 THAP10Q9P2Z0 257 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 GGA2Q9UJY4 613 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 PCDHGC3Q9UN70 934 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 TLR6Q9Y2C9 796 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 SIK3Q9Y2K2 1263 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 CEP83Q9Y592 693 aa14.15□□□□□ -0.14
VPS9D1-204ENST00000565023 ADAMTS9Q9P2N4 1935 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms