RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TFE3P19532 575 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-208ENST00000564703 CDC25BP30305 580 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 GRIA2P42262 883 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 RPS9P46781 194 aaKnown RBP16.56■□□□□ 0.24
RAB40C-208ENST00000564703 DGKGP49619 791 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 ZNF143P52747 638 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-208ENST00000564703 RPL7AP62424 266 aaKnown RBP16.56■□□□□ 0.24
RAB40C-208ENST00000564703 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 PIK3R6Q5UE93 754 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 GRAMD4Q6IC98 578 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 STRADAQ7RTN6 431 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-208ENST00000564703 CHSY1Q86X52 802 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 DNAAF5Q86Y56 855 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 LGI2Q8N0V4 545 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 CLDN23Q96B33 292 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 CNPY3Q9BT09 278 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 SLC2A11Q9BYW1 496 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 CACNG3O60359 315 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 TBL1XO60907 577 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 ATG13O75143 517 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 ENDOD1O94919 500 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 KAT7O95251 611 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 H2AFZP0C0S5 128 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 TACR2P21452 398 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 NUBP1P53384 320 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 GALCP54803 685 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 C15orf59Q2T9L4 293 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 MS4A13Q5J8X5 152 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 RABGAP1LQ5R372 815 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 PPP1R15BQ5SWA1 713 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 RAP1GAP2Q684P5 730 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 FSTL4Q6MZW2 842 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 TRNP1Q6NT89 227 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 LRRC31Q6UY01 552 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 H2AFVQ71UI9 128 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 CCDC105Q8IYK2 499 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 TMEM105Q8N8V8 129 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 ZNF557Q8N988 423 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 HJURPQ8NCD3 748 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 FAM172AQ8WUF8 416 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 NCAPGQ9BPX3 1015 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 THAP2Q9H0W7 228 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 FBRSL1Q9HCM7 1045 aaKnown RBP16.55■□□□□ 0.24
RAB40C-208ENST00000564703 ARHGEF38Q9NXL2 777 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 STIM2Q9P246 746 aa16.55■□□□□ 0.24
RAB40C-208ENST00000564703 TMEM191CA6NGB0 347 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 PAGE1O75459 146 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 EGFP01133 1207 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 PSMA2P25787 234 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 SLC6A4P31645 630 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 TNFRSF4P43489 277 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 KDSRQ06136 332 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 GAB4Q2WGN9 574 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 FAM133BQ5BKY9 247 aaKnown RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 NADSYN1Q6IA69 706 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 C12orf40Q86WS4 652 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 FAM131BQ86XD5 332 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 TMTC1Q8IUR5 882 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 CENPIQ92674 756 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 C1orf74Q96LT6 269 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 HAPLN3Q96S86 360 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 PRRX2Q99811 253 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 IER2Q9BTL4 223 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 RBM12Q9NTZ6 932 aaKnown RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 SPATA6Q9NWH7 488 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 CALCOCO1Q9P1Z2 691 aa16.54■□□□□ 0.24
RAB40C-208ENST00000564703 XPO7Q9UIA9 1087 aaKnown RBP16.54■□□□□ 0.24
RAB40C-208ENST00000564703 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 A0A0A0MRY4 1105 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 IPO7O95373 1038 aaKnown RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 ADRA1BP35368 520 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 CYLC1P35663 651 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 ATXN1P54253 815 aaKnown RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 FZD5Q13467 585 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 AUHQ13825 339 aaKnown RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 CCINQ13939 588 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 E2F5Q15329 346 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 SPA17Q15506 151 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 DTWD2Q8NBA8 298 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 RPRD1AQ96P16 312 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 LUC7LQ9NQ29 371 aaKnown RBP16.53■□□□□ 0.24
RAB40C-208ENST00000564703 SPTLC3Q9NUV7 552 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 FBXO10Q9UK96 956 aa16.53■□□□□ 0.24
RAB40C-208ENST00000564703 HS3ST4Q9Y661 456 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms