RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RRN3Q9NYV6 651 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 IFNKQ9P0W0 207 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 STIM2Q9P246 746 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 FBXO10Q9UK96 956 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 STAP1Q9ULZ2 295 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 LRRC53A6NM62 1247 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 PRRT4C9JH25 899 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 APBB3O95704 486 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 TPM3P06753 285 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 UNGP13051 313 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 ABCB4P21439 1286 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 MMP8P22894 467 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 HOXD9P28356 352 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 HOXA6P31267 233 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 HOXC13P31276 330 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 SLC6A4P31645 630 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 CCR1P32246 355 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 KIR2DL1P43626 348 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 PXNP49023 591 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 SULT1E1P49888 294 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 CLEC16AQ2KHT3 1053 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 FAM133BQ5BKY9 247 aaKnown RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 NADSYN1Q6IA69 706 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 SDE2Q6IQ49 451 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDH1-206ENST00000564676 LONP2Q86WA8 852 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 CHSY1Q86X52 802 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 CCDC117Q8IWD4 279 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 CAMKK1Q8N5S9 505 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 IL17RCQ8NAC3 791 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 HJURPQ8NCD3 748 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 ZBTB44Q8NCP5 570 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 RNF214Q8ND24 703 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 TSTD1Q8NFU3 115 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 UCMAQ8WVF2 138 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 BTN2A3PQ96KV6 586 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 SLC2A11Q9BYW1 496 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 IRX2Q9BZI1 471 aaPredicted RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 EDEM3Q9BZQ6 932 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 NUCKS1Q9H1E3 243 aaKnown RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 ADAM22Q9P0K1 906 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 XPO7Q9UIA9 1087 aaKnown RBP10.31□□□□□ -0.76
CDH1-206ENST00000564676 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 MMP17Q9ULZ9 603 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 SLC27A6Q9Y2P4 619 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 FANCMQ8IYD8 2048 aa10.31□□□□□ -0.76
CDH1-206ENST00000564676 KCNU1A8MYU2 1149 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 F5H5T6 163 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 SGK1O00141 431 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 GFRA2O00451 464 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 AXIN1O15169 862 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 ZBTB24O43167 697 aaPredicted RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 GFRA3O60609 400 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 LILRB5O75023 590 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 ALDH1A2O94788 518 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 F9P00740 461 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 LMNAP02545 664 aaKnown RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 CALB1P05937 261 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 TACR2P21452 398 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 NTSR1P30989 418 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 WASP42768 502 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 SGSHP51688 502 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 DGKEP52429 567 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 RPS24P62847 133 aaKnown RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 CENPCQ03188 943 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 DEUP1Q05D60 604 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 CRY1Q16526 586 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 MS4A13Q5J8X5 152 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 MPP7Q5T2T1 576 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 EGFLAMQ63HQ2 1017 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 RAP1GAP2Q684P5 730 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 IRF2BP2Q7Z5L9 587 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 ANKS1BQ7Z6G8 1248 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 WDR5BQ86VZ2 330 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 CHPFQ8IZ52 775 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 LGI2Q8N0V4 545 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 CPLX3Q8WVH0 158 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 NPY6RQ99463 290 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 SELENOOQ9BVL4 669 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 WDCPQ9H6R7 721 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 POLMQ9NP87 494 aaPredicted RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 METTL5Q9NRN9 209 aaKnown RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 AIPL1Q9NZN9 384 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 TMEM59LQ9UK28 342 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 PTPRZ1P23471 2315 aaPredicted RBP10.3□□□□□ -0.76
CDH1-206ENST00000564676 KIAA1549LQ6ZVL6 1849 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 SDK1Q7Z5N4 2213 aa10.3□□□□□ -0.76
CDH1-206ENST00000564676 CCDC163A0A0D9SF12 145 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 TMCO5BA8MYB1 307 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 CBFA2T2O43439 604 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 HRO43593 1189 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 TIMM44O43615 452 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 ADAM23O75077 832 aa10.29□□□□□ -0.76
CDH1-206ENST00000564676 PABPC1P11940 636 aaKnown RBP10.29□□□□□ -0.76
CDH1-206ENST00000564676 HOXB2P14652 356 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms