RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SYNJ2BP-COX16A0A087WUM0 186 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 GFRA2O00451 464 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 DCLK1O15075 740 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 NPC1O15118 1278 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 RHOBTB1O94844 696 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 IGLV3-25P01717 112 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC2A3P11169 496 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 SGSHP51688 502 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 JAM2P57087 298 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 PITX1P78337 314 aaPredicted RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 SPEM2Q0P670 501 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 EIF4HQ15056 248 aaKnown RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 ELF2Q15723 593 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 NADSYN1Q6IA69 706 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC26A9Q7LBE3 791 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 C11orf74Q86VG3 221 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 CCDC117Q8IWD4 279 aaPredicted RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 DHX40Q8IX18 779 aaKnown RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 ZNF557Q8N988 423 aaPredicted RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 ZNF397Q8NF99 534 aaPredicted RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 LOXL4Q96JB6 756 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 ZC3H10Q96K80 434 aaKnown RBP19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 BTN2A3PQ96KV6 586 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 GABRG3Q99928 467 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 CIPCQ9C0C6 399 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 DDIT4Q9NX09 232 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 ELOVL2Q9NXB9 296 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 CACNA2D2Q9NY47 1150 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 COX16Q9P0S2 106 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 STIM2Q9P246 746 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 USP18Q9UMW8 372 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 SPAG17Q6Q759 2223 aa19.04■□□□□ 0.64
SYNGR3-204ENST00000564642 PTPRZ1P23471 2315 aaPredicted RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 DAB1O75553 588 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 ABCB4P21439 1286 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 NOS2P35228 1153 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 GABRB2P47870 512 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 RNASE9P60153 205 aaKnown RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 CDR2Q01850 454 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 BYSLQ13895 437 aaKnown RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 PLK5Q496M5 336 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 FILIP1LQ4L180 1135 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 APTXQ7Z2E3 356 aaKnown RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 HJURPQ8NCD3 748 aaPredicted RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 WFIKKN2Q8TEU8 576 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 CPA5Q8WXQ8 436 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 ABCB8Q9NUT2 735 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 THAP10Q9P2Z0 257 aaPredicted RBP19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 STON1Q9Y6Q2 735 aa19.03■□□□□ 0.64
SYNGR3-204ENST00000564642 A0A1W2PQF6 199 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 FAM170AA1A519 330 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 SYCE3A1L190 88 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 WASH3PC4AMC7 463 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 LRP3O75074 770 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 HLA-FP30511 346 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 CCR1P32246 355 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 MATKP42679 507 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 NOMO3P69849 1222 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 NME3Q13232 169 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 STARD3Q14849 445 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 MS4A13Q5J8X5 152 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 NAA35Q5VZE5 725 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 RAP1GAP2Q684P5 730 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 CHST9Q7L1S5 443 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 CHSY1Q86X52 802 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 MFN1Q8IWA4 741 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 LGI2Q8N0V4 545 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 AHI1Q8N157 1196 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 SLC20A1Q8WUM9 679 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 RLN3Q8WXF3 142 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 ERLEC1Q96DZ1 483 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 SPACA7Q96KW9 195 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 NUCKS1Q9H1E3 243 aaKnown RBP19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 DUSP15Q9H1R2 295 aaPredicted RBP19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 RRN3Q9NYV6 651 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 XPO7Q9UIA9 1087 aaKnown RBP19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 GGA2Q9UJY4 613 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 NOCTQ9UK39 431 aaKnown RBP19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 RAD54BQ9Y620 910 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 THADAQ6YHU6 1953 aa19.02■□□□□ 0.64
SYNGR3-204ENST00000564642 KCNU1A8MYU2 1149 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 M0QYT0 321 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 MAP3K13O43283 966 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 PABPC1P11940 636 aaKnown RBP19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 GABRG2P18507 467 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 TACR2P21452 398 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 SCNN1AP37088 669 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 RPS24P62847 133 aaKnown RBP19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 MTA1Q13330 715 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 EIF4EBP2Q13542 120 aaPredicted RBP19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 ZNF234Q14588 700 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 TMEM215Q68D42 235 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 KIAA1211LQ6NV74 962 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 XYLT1Q86Y38 959 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 CFAP52Q8N1V2 620 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 CARNMT1Q8N4J0 409 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 OLIG1Q8TAK6 271 aa19.01■□□□□ 0.63
SYNGR3-204ENST00000564642 SORCS1Q8WY21 1168 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms