RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.75□□□□□ -0.69
RNF40-204ENST00000563683 TMEM259Q4ZIN3 620 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 C16orf46Q6P387 395 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 SPATA24Q86W54 205 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 WDR27A2RRH5 827 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 KCNA4P22459 653 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 PMLP29590 882 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 EPHX2P34913 555 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 SPRP35270 261 aaPredicted RBP10.75□□□□□ -0.69
RNF40-204ENST00000563683 GRIK1P39086 918 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 RGS2P41220 211 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 XIAPP98170 497 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 FSCBQ5H9T9 825 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 AAGABQ6PD74 315 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 PLPPR4Q7Z2D5 763 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 TEPSINQ96N21 525 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 CAMKK2Q96RR4 588 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 ELOVL4Q9GZR5 314 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 SLC17A7Q9P2U7 560 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 CPA4Q9UI42 421 aa10.75□□□□□ -0.69
RNF40-204ENST00000563683 RGS20O76081 388 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 VAV1P15498 845 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TGM2P21980 687 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ABCG1P45844 678 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 GDF10P55107 478 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ACTR3P61158 418 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 USP4Q13107 963 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 MYBPC3Q14896 1274 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 SH3PXD2AQ5TCZ1 1133 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 RIPOR1Q6ZS17 1223 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 POLNQ7Z5Q5 900 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 MYLK4Q86YV6 388 aaPredicted RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 WDCPQ9H6R7 721 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 FBXO6Q9NRD1 293 aaPredicted RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 GOLGA8TH3BQL2 631 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 MSCO60682 206 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 PMPCBO75439 489 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TM7SF2O76062 418 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 JCHAINP01591 159 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CCDC166P0CW27 439 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TPH1P17752 444 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CASP2P42575 452 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 GLRBP48167 497 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TKTL1P51854 596 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ZNF280AP59817 542 aaPredicted RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 CDC16Q13042 620 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 FNBP1LQ5T0N5 605 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TAS1R3Q7RTX0 852 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CPT1BQ92523 772 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 PABPC5Q96DU9 382 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 UNKQ9C0B0 810 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 TCRBV9S1A1TA0A576 114 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 AIM2O14862 343 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 B4GALT4O60513 344 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ATP5BP06576 529 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 MLH1P40692 756 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 COG7P83436 770 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 SLC12A1Q13621 1099 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 HSP90AA5PQ58FG0 334 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TMCO4Q5TGY1 634 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 IL31Q6EBC2 164 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TRIM67Q6ZTA4 783 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ADGRG6Q86SQ4 1221 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 HTR3CQ8WXA8 447 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 USP6NLQ92738 828 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CELF6Q96J87 481 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 ACSS3Q9H6R3 686 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ETNK2Q9NVF9 386 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 DNAJC16Q9Y2G8 782 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 TNRC6CQ9HCJ0 1690 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 DDX60LQ5H9U9 1706 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 GMNNO75496 209 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 DGKIO75912 1065 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 FAM155BO75949 473 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 CSPG5O95196 566 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 IL1BP01584 269 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 HMBSP08397 361 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 MGAT1P26572 445 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 WNT7BP56706 349 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 RPL26P61254 145 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 YWHAZP63104 245 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 HNRNPDQ14103 355 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 ACAP1Q15027 740 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 XYLT1Q86Y38 959 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 OR6Y1Q8NGX8 325 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 GSDMBQ8TAX9 411 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 PDCD6IPQ8WUM4 868 aaKnown RBP10.74□□□□□ -0.69
RNF40-204ENST00000563683 PFDN4Q9NQP4 134 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 KCNK4Q9NYG8 393 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms