RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ARNTLO00327 626 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 BUB1O43683 1085 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 ADH5P11766 374 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 TACR2P21452 398 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 ADRA1BP35368 520 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 SLC1A1P43005 524 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 SCAPQ12770 1279 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 DHCR24Q15392 516 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 FAM133BQ5BKY9 247 aaKnown RBP19.48■□□□□ 0.71
RAB40C-207ENST00000563109 MS4A13Q5J8X5 152 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 PIK3R6Q5UE93 754 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 NADSYN1Q6IA69 706 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 C11orf63Q6NUN7 778 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 TPGS1Q6ZTW0 290 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 ADGRG2Q8IZP9 1017 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 SIK2Q9H0K1 926 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 CD320Q9NPF0 282 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 HS3ST4Q9Y661 456 aa19.48■□□□□ 0.71
RAB40C-207ENST00000563109 COL4A3Q01955 1670 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 GOLGA6L7A0A1B0GV03 622 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 ZSCAN12O43309 604 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 SPOPO43791 374 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 BUB1BO60566 1050 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-207ENST00000563109 AMPD2Q01433 879 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 GAD2Q05329 585 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 ANO4Q32M45 955 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 MPPE1Q53F39 396 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 RABGAP1LQ5R372 815 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 LY6G5CQ5SRR4 150 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 LRRC31Q6UY01 552 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 DAAM2Q86T65 1068 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 LGI2Q8N0V4 545 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 HJURPQ8NCD3 748 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-207ENST00000563109 TPCN2Q8NHX9 752 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 DDI1Q8WTU0 396 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 BBS2Q9BXC9 721 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 GTSE1Q9NYZ3 720 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 TRIM10Q9UDY6 481 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 FBXL21Q9UKT6 434 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 FZD10Q9ULW2 581 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 AP4E1Q9UPM8 1137 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 DUSP10Q9Y6W6 482 aa19.47■□□□□ 0.71
RAB40C-207ENST00000563109 NEDD8-MDP1E9PL57 170 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TRDMT1O14717 391 aaKnown RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TSPAN3O60637 253 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 SLC6A4P31645 630 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 ERMARDQ5T6L9 678 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TTC39BQ5VTQ0 682 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 DAB2IPQ5VWQ8 1189 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 RFWD3Q6PCD5 774 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 ZNF662Q6ZS27 426 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TMEM25Q86YD3 366 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 PSTKQ8IV42 348 aaKnown RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 RNF10Q8N5U6 811 aaKnown RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 ARFGAP1Q8N6T3 406 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TTC8Q8TAM2 541 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TMA16Q96EY4 203 aaKnown RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 C1orf74Q96LT6 269 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 PEBP4Q96S96 227 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 SNRNP25Q9BV90 132 aaKnown RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 OSBPL2Q9H1P3 480 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 C8orf33Q9H7E9 229 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-207ENST00000563109 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 LZTFL1Q9NQ48 299 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 ANLNQ9NQW6 1124 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 TMPRSS4Q9NRS4 437 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 MARK1Q9P0L2 795 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 SALL4Q9UJQ4 1053 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 GUCA1BQ9UMX6 200 aa19.46■□□□□ 0.71
RAB40C-207ENST00000563109 A0A0U1RQJ8 604 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 HOXC11O43248 304 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 SLC34A2O95436 690 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 KRT7P08729 469 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 GJC1P36383 396 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 GGCXP38435 758 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 MLLT6P55198 1093 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 SLC25A11Q02978 314 aaKnown RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 AUHQ13825 339 aaKnown RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 BOLA3Q53S33 107 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 RHBDF2Q6PJF5 856 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 CCDC117Q8IWD4 279 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 SYCE1Q8N0S2 351 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 ATRIPQ8WXE1 791 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 BHMTQ93088 406 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 EXOC4Q96A65 974 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 PRICKLE1Q96MT3 831 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 RPRD1AQ96P16 312 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 XPO6Q96QU8 1125 aaKnown RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 PRMT1Q99873 361 aaKnown RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 DHX35Q9H5Z1 703 aaKnown RBP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 VANGL2Q9ULK5 521 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
RAB40C-207ENST00000563109 PIAS3Q9Y6X2 628 aa19.45■□□□□ 0.7
RAB40C-207ENST00000563109 E9PAM4 449 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 I6L893 689 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-207ENST00000563109 TBL1XO60907 577 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 MOCS3O95396 460 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 TYRP14679 529 aa19.44■□□□□ 0.7
RAB40C-207ENST00000563109 GLULP15104 373 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms