RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ADGRF1Q5T601 910 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 LCLAT1Q6UWP7 414 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 RAB44Q7Z6P3 723 aaPredicted RBP17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ADIPOR2Q86V24 386 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 FAM124AQ86V42 546 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZNF366Q8N895 744 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 OR2T3Q8NH03 318 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 C1orf216Q8TAB5 229 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 SLC35F5Q8WV83 523 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZCCHC14Q8WYQ9 949 aaKnown RBP17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZSWIM1Q9BR11 485 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 NUP58Q9BVL2 599 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZDHHC5Q9C0B5 715 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 IL21RQ9HBE5 538 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ABCB8Q9NUT2 735 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 KIAA1257Q9ULG3 409 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 SLCO1B1Q9Y6L6 691 aa17.41■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ITPR1Q14643 2758 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 SRRM3A6NNA2 597 aaPredicted RBP17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 PIK3R2O00459 728 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 BCAT2O15382 392 aaPredicted RBP17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 LATS1O95835 1130 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 IGLV3-27P01718 113 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 C7P10643 843 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 FMO5P49326 533 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 RGS7P49802 495 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZNF445P59923 1031 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 ZNF423Q2M1K9 1284 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 PMF1Q6P1K2 205 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 MSANTD2Q6P1R3 559 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 TMEM270Q6UE05 265 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 CHST9Q7L1S5 443 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 WFDC5Q8TCV5 224 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 WFIKKN2Q8TEU8 576 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 CLEC4CQ8WTT0 213 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 KAT5Q92993 513 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 EIF2B4Q9UI10 523 aaKnown RBP17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 GGA2Q9UJY4 613 aa17.4■□□□□ 0.38
VPS9D1-AS1-201ENST00000562298 RNF225M0QZC1 329 aaPredicted RBP17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CBFA2T3O75081 653 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CALCAP01258 141 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PAEPP09466 180 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PABPC1P11940 636 aaKnown RBP17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SLC6A4P31645 630 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ACSL1P33121 698 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FNDC3BQ53EP0 1204 aaKnown RBP17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 RFWD3Q6PCD5 774 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 AHI1Q8N157 1196 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SMARCE1Q969G3 411 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PLA2G4CQ9UP65 541 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LOC400499M0QZD8 3231 aa17.39■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 M0QYV0 167 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 SMC2O95347 1197 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FTH1P19P0C7X4 201 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CD70P32970 193 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 RDXP35241 583 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FAM133BQ5BKY9 247 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PIK3R6Q5UE93 754 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MBLAC2Q68D91 279 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PNPLA1Q8N8W4 532 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LMO3Q8TAP4 145 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 IRGQQ8WZA9 623 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LHX5Q9H2C1 402 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 GAREM1Q9H706 876 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PRSS16Q9NQE7 514 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PCOLCE2Q9UKZ9 415 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 FNDC3AQ9Y2H6 1198 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PCDHB9Q9Y5E1 797 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PCDHB4Q9Y5E5 795 aa17.38■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PMM2O15305 246 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 LTFP02788 710 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CAPNS1P04632 268 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 DLDP09622 509 aaKnown RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CD44P16070 742 aaKnown RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CNGA2Q16280 664 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 HLA-BQ31612 363 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 MPP7Q5T2T1 576 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ISM2Q6H9L7 571 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 NADSYN1Q6IA69 706 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PPM1KQ8N3J5 372 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ADAMTS14Q8WXS8 1223 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PRICKLE1Q96MT3 831 aaPredicted RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 NT5C1BQ96P26 610 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PCED1AQ9H1Q7 454 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 METTL14Q9HCE5 456 aaKnown RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TM7SF3Q9NS93 570 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 CELSR3Q9NYQ7 3312 aa17.37■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 A0A1B0GVT2 93 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 PSMA7O14818 248 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 ACSL4O60488 711 aa17.36■□□□□ 0.37
VPS9D1-AS1-201ENST00000562298 TBL1XO60907 577 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms