RNA–Protein interactions for RNA: ENST00000560618.5

CIB2-208, Transcript of calcium and integrin binding family member 2, human

TSL 2 BASIC

Gene CIB2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIB2-208	ENST00000560618	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	HJURP	Q8NCD3	748 aa	Predicted RBP	18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	ANKRD20A12P	Q8NF67	263 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	WFIKKN2	Q8TEU8	576 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	RLN3	Q8WXF3	142 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	ERLEC1	Q96DZ1	483 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	DDX50	Q9BQ39	737 aa	Known RBP	18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	CIPC	Q9C0C6	399 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	PDCL3	Q9H2J4	239 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	FAM204A	Q9H8W3	233 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	CALCOCO1	Q9P1Z2	691 aa		18.71	■□□□□ 0.59
CIB2-208	ENST00000560618	SDK1	Q7Z5N4	2213 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	WASH3P	C4AMC7	463 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	FOXD2	O60548	495 aa	Predicted RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	TBL1X	O60907	577 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	DAB1	O75553	588 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	GRAP2	O75791	330 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	ZNF18	P17022	549 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	NDUFV2	P19404	249 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	MPL	P40238	635 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	IL12RB1	P42701	662 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	CDK17	Q00537	523 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	BYSL	Q13895	437 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	NCAPH	Q15003	741 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	E2F5	Q15329	346 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	CCDC6	Q16204	474 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	PLA2G2C	Q5R387	149 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	TAF3	Q5VWG9	929 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	OR6B2	Q6IFH4	312 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	SLC26A9	Q7LBE3	791 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	NOP9	Q86U38	636 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	TMEM35B	Q8NCS4	154 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	WFDC5	Q8TCV5	224 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	EPS8L1	Q8TE68	723 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	DDX1	Q92499	740 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	MYEOV	Q96EZ4	313 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	NUCKS1	Q9H1E3	243 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	HSD3B7	Q9H2F3	369 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	ABCB8	Q9NUT2	735 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	DLL3	Q9NYJ7	618 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	GGA2	Q9UJY4	613 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	SIK3	Q9Y2K2	1263 aa		18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.7	■□□□□ 0.58
CIB2-208	ENST00000560618	CKAP5	Q14008	2032 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	TYW5	A2RUC4	315 aa	Known RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	LGALS16	A8MUM7	142 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	EPHB6	O15197	1021 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	ZBTB24	O43167	697 aa	Predicted RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	LSM8	O95777	96 aa	Known RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	JAM2	P57087	298 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	POLR2F	P61218	127 aa	Known RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	SLC6A3	Q01959	620 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	ZNF234	Q14588	700 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	STARD3	Q14849	445 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	SYCP1	Q15431	976 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	MS4A13	Q5J8X5	152 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	ZDHHC17	Q8IUH5	632 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	AOPEP	Q8N6M6	819 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	FRMD1	Q8N878	549 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	ZNF557	Q8N988	423 aa	Predicted RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	ZNF397	Q8NF99	534 aa	Predicted RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	SORCS1	Q8WY21	1168 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	BTN2A3P	Q96KV6	586 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	DDIT4	Q9NX09	232 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	XPO7	Q9UIA9	1087 aa	Known RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	MBD1	Q9UIS9	605 aa	Predicted RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	CDV3	Q9UKY7	258 aa	Known RBP	18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	DAAM1	Q9Y4D1	1078 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	THADA	Q6YHU6	1953 aa		18.69	■□□□□ 0.58
CIB2-208	ENST00000560618	BCLAF3	A2AJT9	711 aa	Known RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	TIMM44	O43615	452 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	ZNF806	P0C7X5	589 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	PABPC1	P11940	636 aa	Known RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	SDHB	P21912	280 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	CD70	P32970	193 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	RPS24	P62847	133 aa	Known RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	CREB5	Q02930	508 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	PUM1	Q14671	1186 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	SF3A2	Q15428	464 aa	Known RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	FUT11	Q495W5	492 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	CHST9	Q7L1S5	443 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	ADIPOR2	Q86V24	386 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	CHSY1	Q86X52	802 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	MFN1	Q8IWA4	741 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	AHI1	Q8N157	1196 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	MRGPRX1	Q96LB2	322 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	SLC6A17	Q9H1V8	727 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	SMOC1	Q9H4F8	434 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	NLRC4	Q9NPP4	1024 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	VPS45	Q9NRW7	570 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	STIM2	Q9P246	746 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	NOCT	Q9UK39	431 aa	Known RBP	18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	DNAH14	Q0VDD8	3507 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	ABCA7	Q8IZY2	2146 aa		18.68	■□□□□ 0.58
CIB2-208	ENST00000560618	DCHS1	Q96JQ0	3298 aa		18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms