RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 GABRR2P28476 465 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 L1CAMP32004 1257 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 CHRNA3P32297 505 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 CDKN2BP42772 138 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 MTHFRP42898 656 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 NRIP1P48552 1158 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 HCAR3P49019 387 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 SLC11A2P49281 568 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 ZC3H12AQ5D1E8 599 aaKnown RBP6.66□□□□□ -1.34
SPG11-221ENST00000560299 DCAF12L1Q5VU92 463 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 KAZNQ674X7 775 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 TXNRD3NBQ6F5E7 133 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 MFSD7Q6UXD7 560 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 LRRC31Q6UY01 552 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 BBS12Q6ZW61 710 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 GPR149Q86SP6 731 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 RBM23Q86U06 439 aaKnown RBP6.66□□□□□ -1.34
SPG11-221ENST00000560299 CPNE8Q86YQ8 564 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 MIB1Q86YT6 1006 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 RFX6Q8HWS3 928 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 KIAA1958Q8N8K9 716 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 VN1R2Q8NFZ6 395 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 GRK7Q8WTQ7 553 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 RAPGEF5Q92565 580 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 MAGOHBQ96A72 148 aaKnown RBP6.66□□□□□ -1.34
SPG11-221ENST00000560299 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 BTN2A3PQ96KV6 586 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 C1orf74Q96LT6 269 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 PEBP4Q96S96 227 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 FERMT1Q9BQL6 677 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 CORO1BQ9BR76 489 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 AP1M1Q9BXS5 423 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 PRKD2Q9BZL6 878 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 DCLK3Q9C098 648 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 OSBPL2Q9H1P3 480 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 SLITRK6Q9H5Y7 841 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 OSER1Q9NX31 292 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 ARHGEF38Q9NXL2 777 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 OR12D3Q9UGF7 316 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 CD207Q9UJ71 328 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 ZNF510Q9Y2H8 683 aa6.66□□□□□ -1.34
SPG11-221ENST00000560299 TRAV19A0A0A6YYK7 116 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CCDC195A0A1B0GUA6 201 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 C3orf70A6NLC5 250 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 KCNU1A8MYU2 1149 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 APOC4-APOC2K7ER74 178 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 APOL1O14791 398 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 PER2O15055 1255 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 COCHO43405 550 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CREB3O43889 395 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CST8O60676 142 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 PHF2O75151 1096 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TBX10O75333 385 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TBX18O95935 607 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 OAS1P00973 400 aaKnown RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 APOC2P02655 101 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 MYL4P12829 197 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 EPCAMP16422 314 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 HDCP19113 662 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TGM2P21980 687 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 WEE1P30291 646 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 SERPINB6P35237 376 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 NR2C2P49116 596 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 FNTAP49354 379 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ARSEP51690 589 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ATXN1P54253 815 aaKnown RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 EPHA5P54756 1037 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 MLLT6P55198 1093 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 TPI1P60174 286 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 PITX1P78337 314 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 EIF4EBP2Q13542 120 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 DPYSL3Q14195 570 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CCNG2Q16589 344 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TAZQ16635 292 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ATAT1Q5SQI0 421 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 TEX35Q5T0J7 233 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CES5AQ6NT32 575 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 C8orf74Q6P047 294 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 SYCE2Q6PIF2 218 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ADAT2Q7Z6V5 191 aaKnown RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 ADGRD2Q7Z7M1 963 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 DDX42Q86XP3 938 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPG11-221ENST00000560299 ADHFE1Q8IWW8 467 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CCDC105Q8IYK2 499 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 MMGT1Q8N4V1 131 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 CCDC185Q8N715 623 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 FAM71BQ8TC56 605 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 P3H4Q92791 437 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 AZIN2Q96A70 460 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 ACSF2Q96CM8 615 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 HAUS1Q96CS2 278 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 SLC39A13Q96H72 371 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 FCRL2Q96LA5 508 aaPredicted RBP6.65□□□□□ -1.34
SPG11-221ENST00000560299 RIPOR3Q96MK2 946 aa6.65□□□□□ -1.34
SPG11-221ENST00000560299 RNF157Q96PX1 679 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms