RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 LRCH4O75427 683 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 CYP17A1P05093 508 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 SLC2A3P11169 496 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 TCF3P15923 654 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 MIPP30301 263 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 NUMBP49757 651 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 SGSHP51688 502 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 EIF4EBP2Q13542 120 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 MS4A13Q5J8X5 152 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 KCNT1Q5JUK3 1230 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PIK3R6Q5UE93 754 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 CIR1Q86X95 450 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 NAT16Q8N8M0 369 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 FNIP1Q8TF40 1166 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 HSPH1Q92598 858 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 CENPIQ92674 756 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 IRF7Q92985 503 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 NXPE3Q969Y0 559 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 BTN2A3PQ96KV6 586 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 STIM2Q9P246 746 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PYCARDQ9ULZ3 195 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 HS3ST4Q9Y661 456 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 DOCK4Q8N1I0 1966 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 PJA2O43164 708 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 SPOPO43791 374 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 PROSCO94903 275 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ENDOD1O94919 500 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 NFATC1O95644 943 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 SRFP11831 508 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TACR2P21452 398 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 IRAK1P51617 712 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TAS2R40P59535 323 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 RUNX3Q13761 415 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 DHCR24Q15392 516 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 CA9Q16790 459 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ARL13BQ3SXY8 428 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 NAIF1Q69YI7 327 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TXNRD3NBQ6F5E7 133 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 SLFN11Q7Z7L1 901 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TMEM25Q86YD3 366 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TXLNBQ8N3L3 684 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 MYEOVQ96EZ4 313 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 SNRNP25Q9BV90 132 aaKnown RBP12.87□□□□□ -0.35
GABPB1-208ENST00000558970 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 SPHK2Q9NRA0 654 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 FBXL21Q9UKT6 434 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 DUSP12Q9UNI6 340 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 TRIOO75962 3097 aa12.87□□□□□ -0.35
GABPB1-208ENST00000558970 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 F5H5T6 163 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 KRT86O43790 486 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 CREB3O43889 395 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 TBL1XO60907 577 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 MTA2O94776 668 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 ADH5P11766 374 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 COMTP21964 271 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 IL1R2P27930 398 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 ADRA1BP35368 520 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 CHKAP35790 457 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 AUHQ13825 339 aaKnown RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 ITPRIPL2Q3MIP1 535 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 PPP6R3Q5H9R7 873 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-208ENST00000558970 EFHC2Q5JST6 749 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 FAM72DQ6L9T8 149 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 C14orf80Q86SX3 495 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 FAM72BQ86X60 149 aa12.86□□□□□ -0.35
GABPB1-208ENST00000558970 ADGRG2Q8IZP9 1017 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms